PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX60511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28329.5 Da PI: 8.2804 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 100.4 | 2.5e-31 | 9 | 87 | 52 | 129 |
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ ++e+vg++ktLvfy++rap+g kt W+mhe+rle RDX60511.1 9 KLNASEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVFDPtTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 87 44678**************************************977888***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MRALTEVAKL NASEWYFFSF RDRKYATGFR TNRATTSGYW KATGKDRTVF DPTTREVVGM 60 RKTLVFYRNR APNGIKTGWI MHEFRLETPH MPPKEDWVLC RVFHKGKADN SAKLNPQLMY 120 ESTVPSLTLA SSSPTNQTTP IGYNQLAPFS SSMTTHHHNN HNNNHHHYHH QQHPDPSQNN 180 NSLMSLLQFS RETNTNSSTV TQISPKCDDG YGFLWDMDLE ETSFHDGVAS NLDGMRFEVD 240 NNSVVLL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 1e-64 | NAC family protein |