PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX60263.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 326aa MW: 36745.2 Da PI: 5.799 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64 | 2.2e-20 | 57 | 112 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ +++t+ q+ee+e++F+++++p+ ++r+eL+++lgL+ qVk+WFqN+R+++k RDX60263.1 57 KKGYRRHTQRQIEEMEAFFKQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 112 577889***********************************************999 PP | |||||||
2 | START | 30.6 | 7.8e-11 | 246 | 322 | 1 | 68 |
HHHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCC CS START 1 elaeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv......dsgealrasgvvdmvlallveelldd 68 ela +a++el ++a+a++ +Wv s e++n+de+l++f+ + ++ea+r+s+vv+m++ +l +l+d+ RDX60263.1 246 ELAVAAMEELTRLAQAGDSLWVPGShhsEILNEDEYLRTFPARGLgpkplgLRSEASRESVVVIMNHINLIDILMDV 322 57899*****************999999************77666******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MFQTNMFDSH THMLEMSSRS ESDLGKARDD EYDSKFGTDT IDPPSGDDQD PNPRPKKKGY 60 RRHTQRQIEE MEAFFKQCPH PDDKQRKELS RELGLEPLQV KFWFQNKRTQ MKTQQERNEN 120 AILKAENEKL RAENNRYKEA LTNATCPNCG GPAALGEMSF DEQHLRIENA RLREEIDRIS 180 GIAAKYVGKP VTSSYSNLSS LNNNHMHVGN YGAHSQCGVV GEMYGGSDLF RSLPAPGDAD 240 KPMIVELAVA AMEELTRLAQ AGDSLWVPGS HHSEILNEDE YLRTFPARGL GPKPLGLRSE 300 ASRESVVVIM NHINLIDILM DVVSVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 1e-155 | HD-ZIP family protein |