PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX59307.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

TCP

Protein Properties

Length: 355aa MW: 39141.6 Da PI: 9.0501

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX59307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	102.2	9e-32	50	159	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.........sec.eaesssssasnsssg.. 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl++ak++i+el+ ++++++ s + ++++ s s+s+++++ RDX59307.1 50 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLNAAKHEIDELPPLPNIPSvnnftlgypSTVvTSNEASTSHSQPNEQll 148 689*************************************************************88888654333332111222222222222222244 PP TCP 89 ..........k 89 + RDX59307.1 149 ningsiqwegS 159 44444444441 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MIKSPKEADF PPKQEGHSNS SDHEKAKASS SSAQWPRLKD PRIVRVSRAF GGKDRHSKVC 60 TIRGLRDRRV RLSVPTAIQL YDLQDRLGLS QPSKVVDWLL NAAKHEIDEL PPLPNIPSVN 120 NFTLGYPSTV VTSNEASTSH SQPNEQLLNI NGSIQWEGSS QINSVWKLKP KEVSGEILVS 180 TDKANWINRS EEDKQGGNNN EGPSTHVIPN NLLPRANHPS FLGLLNNMPH GYQWEPSAGD 240 VSHQLGNNGL SNHTDLHSIN VVPFPTSTLS LSTGNSQILL CPQGATQSYF PSHVSAMDMD 300 PRQINHYQLL NSGSQNPLAN SLNNSFSLAM MTHKPLHSRN TSKSPSHKDQ DFSSK

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MIKSPKEADF PPKQEGHSNS SDHEKAKASS SSAQWPRLKD PRIVRVSRAF GGKDRHSKVC  60
TIRGLRDRRV RLSVPTAIQL YDLQDRLGLS QPSKVVDWLL NAAKHEIDEL PPLPNIPSVN  120
NFTLGYPSTV VTSNEASTSH SQPNEQLLNI NGSIQWEGSS QINSVWKLKP KEVSGEILVS  180
TDKANWINRS EEDKQGGNNN EGPSTHVIPN NLLPRANHPS FLGLLNNMPH GYQWEPSAGD  240
VSHQLGNNGL SNHTDLHSIN VVPFPTSTLS LSTGNSQILL CPQGATQSYF PSHVSAMDMD  300
PRQINHYQLL NSGSQNPLAN SLNNSFSLAM MTHKPLHSRN TSKSPSHKDQ DFSSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	2e-50	TCP family protein