PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58352.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 738aa MW: 82473.2 Da PI: 5.8121

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58352.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	21.1	5.7e-07	116	137	5	27
--SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27 C ff++ G+C GdrC F Hgp RDX58352.1 116 ACIFFQK-GHCLKGDRCAFLHGP 137 7****.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 738 aa Download sequence
MGAQQPQLQL QPAPSSQDEA AKRNTDCVYF LASPLTCKKG NECEYRHSEY ARVNPRDCWY 60 WTTGKCLNPK CSFRHPPLDG LLTQAATAGG PSAPPSQIPT ASATHVPYNS SKQAVACIFF 120 QKGHCLKGDR CAFLHGPSIP NTGNKVSAQV PVTSQGAENP SFKKPFGSTE KYIQERKNSQ 180 GNVAKSGGGP EAKPAPKIET APQRNMFELE KKVPLPSAGF NNEASRFKTS SPPVSNGPTV 240 ARSNRLNQAR VPDDHSFHSG KDSDEFLRES SPGFDVLVAD ELRNSDYYHG EDEFGKARGQ 300 DERNLDSLNE YDLGHSGDYS LAADIDRDRF RVPQGYESYD HMQEPYVWEQ HRKAPAHLDR 360 RTRRRSDSPE NAEVSDLRHH LSKRRKGVNG LKSVVSHDYA LEGHGEEQSH RSFSRKDPLQ 420 LSLNESSLGN RFRGRIKLPA NGGGDHLERD DRGRIRSRLS SGSLPATHSG RIHDRMRGRL 480 QDDERRNSKE RLRGRELMGD ASDFAGPKSL AELKTGRNTE SREQQPLGRR RSLRDHLQSE 540 DDFQFEGPKP LSEILKEKRG TGAGADDRNG KSSDNKNEEV TYGSDPMPVA NTQNGVLSEA 600 KEEVKNDLLN NEDESKLQVT DAAGGDINAT HGQSYEEGVL YDEAAEDQYY EGDDQRDGDY 660 EYEQGDEGYY EEYEQGDEGE NQEQDYMDEE EDGDDFAKKI GVVHSSENIL KIRIVSTNKY 720 SLLIKMISID APKMAMIR

Sequence ? help Back to Top

Protein Sequence Length: 738 aa Download sequence

MGAQQPQLQL QPAPSSQDEA AKRNTDCVYF LASPLTCKKG NECEYRHSEY ARVNPRDCWY  60
WTTGKCLNPK CSFRHPPLDG LLTQAATAGG PSAPPSQIPT ASATHVPYNS SKQAVACIFF  120
QKGHCLKGDR CAFLHGPSIP NTGNKVSAQV PVTSQGAENP SFKKPFGSTE KYIQERKNSQ  180
GNVAKSGGGP EAKPAPKIET APQRNMFELE KKVPLPSAGF NNEASRFKTS SPPVSNGPTV  240
ARSNRLNQAR VPDDHSFHSG KDSDEFLRES SPGFDVLVAD ELRNSDYYHG EDEFGKARGQ  300
DERNLDSLNE YDLGHSGDYS LAADIDRDRF RVPQGYESYD HMQEPYVWEQ HRKAPAHLDR  360
RTRRRSDSPE NAEVSDLRHH LSKRRKGVNG LKSVVSHDYA LEGHGEEQSH RSFSRKDPLQ  420
LSLNESSLGN RFRGRIKLPA NGGGDHLERD DRGRIRSRLS SGSLPATHSG RIHDRMRGRL  480
QDDERRNSKE RLRGRELMGD ASDFAGPKSL AELKTGRNTE SREQQPLGRR RSLRDHLQSE  540
DDFQFEGPKP LSEILKEKRG TGAGADDRNG KSSDNKNEEV TYGSDPMPVA NTQNGVLSEA  600
KEEVKNDLLN NEDESKLQVT DAAGGDINAT HGQSYEEGVL YDEAAEDQYY EGDDQRDGDY  660
EYEQGDEGYY EEYEQGDEGE NQEQDYMDEE EDGDDFAKKI GVVHSSENIL KIRIVSTNKY  720
SLLIKMISID APKMAMIR