PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58259.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 155aa MW: 18123.9 Da PI: 9.973

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58259.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.2	1.2e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtfskRr g+lKKA E+SvLCda+va+i+fs++gkl e+s+ RDX58259.1 9 KRIENKINRQVTFSKRRSGLLKKAREISVLCDADVALIVFSTKGKLSEFST 59 79***********************************************96 PP
2	K-box	73.3	7.2e-25	75	146	1	72
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnel 72 y++++ ++++++ +e++ e++kLk+++e Lq +qR+++Ge+L+sL+lk Lq+LeqqL+++lk+iRs+K +l RDX58259.1 75 YAERQLVANDQESNENWVIEHEKLKARMEVLQPNQRNFMGEELDSLNLKGLQNLEQQLDSALKHIRSRKVKL 146 56778888889999*******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence
MGRGKVELKR IENKINRQVT FSKRRSGLLK KAREISVLCD ADVALIVFST KGKLSEFSTQ 60 PSMERILERY ERYSYAERQL VANDQESNEN WVIEHEKLKA RMEVLQPNQR NFMGEELDSL 120 NLKGLQNLEQ QLDSALKHIR SRKVKLCNLV SWICN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60910.1	4e-75	MIKC_MADS family protein