PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX58224.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 501aa MW: 55058.5 Da PI: 5.9815

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX58224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.6	2.3e-11	181	237	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + rk + g ++ +e+Aa+a++ a++k++g RDX58224.1 181 SIYRGVTRHRWTGRYEAHLWDnSCR-RegqARKGRQ-GGYDKEEKAARAYDLAALKYWG 237 57*****************4444.2344336655.779999************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence
MAGATNWLTF SLTPMEMLRS PDSQFVSYDT SSHCFVDNFY ANNGWANSKG LMDSQSENQP 60 LAVPKMEDFF DNKMETQDNS SLTQIYDQGS ASVYFSDQQD LKAIPGFQAF SATNSGSELD 120 DSASNKTRVA PGELGAHNSV ESCKGALSLC DVAHGSEDKA IVAAEFDNPK KVAHTFGQRT 180 SIYRGVTRHR WTGRYEAHLW DNSCRREGQA RKGRQGGYDK EEKAARAYDL AALKYWGPTA 240 TTNFPIANYT KELEEMKHAG KQEFIASLRR YAYAGQLYVF STTCLYAGTK IVLVLAGKVV 300 VFQGELPLSG VSRGIINRVD GKQELVELRE TKIYTWEHLL NIFGSCIVTA TEEEAAEAYD 360 IAAIKFRGAN AVTNFEMSRY DVEAILNSSL PVGGVAKRLK LSPEYENKAP MAISTSQQQP 420 QCINVSSSIN FSTIQPLASI PFDSANTCYP HNNLFHNFHP TNGGSSTAES AATVTNATSL 480 TTTLPPPPPV PGFFIWPPQS Y

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence

MAGATNWLTF SLTPMEMLRS PDSQFVSYDT SSHCFVDNFY ANNGWANSKG LMDSQSENQP  60
LAVPKMEDFF DNKMETQDNS SLTQIYDQGS ASVYFSDQQD LKAIPGFQAF SATNSGSELD  120
DSASNKTRVA PGELGAHNSV ESCKGALSLC DVAHGSEDKA IVAAEFDNPK KVAHTFGQRT  180
SIYRGVTRHR WTGRYEAHLW DNSCRREGQA RKGRQGGYDK EEKAARAYDL AALKYWGPTA  240
TTNFPIANYT KELEEMKHAG KQEFIASLRR YAYAGQLYVF STTCLYAGTK IVLVLAGKVV  300
VFQGELPLSG VSRGIINRVD GKQELVELRE TKIYTWEHLL NIFGSCIVTA TEEEAAEAYD  360
IAAIKFRGAN AVTNFEMSRY DVEAILNSSL PVGGVAKRLK LSPEYENKAP MAISTSQQQP  420
QCINVSSSIN FSTIQPLASI PFDSANTCYP HNNLFHNFHP TNGGSSTAES AATVTNATSL  480
TTTLPPPPPV PGFFIWPPQS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	1e-109	AP2 family protein