PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RDX57691.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 211aa MW: 24179.5 Da PI: 8.5757 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59 | 8e-19 | 89 | 143 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq Le+ F+ +++++ +++eLA++l+L++rqV vWFqNrRa+ k RDX57691.1 89 RKKLRLSKEQSAMLENSFKLHSTLNPVQKQELADQLNLKTRQVEVWFQNRRARTK 143 677889***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 110.6 | 1.1e-35 | 89 | 177 | 1 | 90 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +kk+rlskeq+++LE+sF+ +++L+p +K+ela +L+l++rqv+vWFqnrRARtk+kq+E+d e Lk+++++l++en+rL++e +eLr + RDX57691.1 89 RKKLRLSKEQSAMLENSFKLHSTLNPVQKQELADQLNLKTRQVEVWFQNRRARTKLKQTEVDRELLKKHCQNLSDENRRLKRELQELR-A 177 69*************************************************************************************9.4 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MENDEECITG LYLGLGMGGH VPKKDKQKEN KPVACFDLAF ELCPKGEAIN VNHNKVDRFS 60 LEGIHEGYEY ANEKSTDSDN SNHNHNGCRK KLRLSKEQSA MLENSFKLHS TLNPVQKQEL 120 ADQLNLKTRQ VEVWFQNRRA RTKLKQTEVD RELLKKHCQN LSDENRRLKR ELQELRALKV 180 GTSPLCIQLA KTTSLIMCSS CEKLVKLNEG N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 146 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 4e-48 | HD-ZIP family protein |