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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g995960.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 111aa MW: 13073.5 Da PI: 10.2359 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 42.3 | 2.2e-13 | 3 | 53 | 44 | 97 |
DUF573 44 sisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++v+k+ql +KirrLKkK++++++k k+ + k+h+ k+f+lskk+W+ Pd.00g995960.m01 3 LLKADVNKTQLQDKIRRLKKKYETNMAK---WKKYNTFKPHELKVFDLSKKVWD 53 6899************************...66667789**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence |
MNLLKADVNK TQLQDKIRRL KKKYETNMAK WKKYNTFKPH ELKVFDLSKK VWDSGEGFAV 60 SVGWRELGLL EGCLEFIGEP KLAELKKEWK KMHVAELELL VRMGVLMREH A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 3e-09 | GeBP family protein |