PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g993610.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 420aa MW: 47346.8 Da PI: 7.3576 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.1 | 2.6e-30 | 245 | 299 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m ++gLt+ hvkSHLQkYR+ Pd.00g993610.m01 245 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILRMMCLDGLTIFHVKSHLQKYRI 299 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 45.6 | 1.7e-14 | 249 | 298 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW ++++e++v++v++lGg t+k+I r+m g+t ++ks++qky+ Pd.00g993610.m01 249 RWNQDLHEKFVECVNRLGGAdkaTPKAILRMMClDGLTIFHVKSHLQKYR 298 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 420 aa Download sequence |
MNAQKIDCQE RIIQQSHGLI SDFNFELGSQ SSQILDLQQA WNMGIWVQQP TEDQPNMSQL 60 QNHGLPRSPS SIMSRFESPA SAFYATERCM GFSQYHSHVG NSQFPSGQTY NESYSSMDSS 120 EQADPNLDIR NTLQSIVKSQ PSSYHQYQKS SEKPNQIPLP SNNLFEHQQN KLHGESTASV 180 RRPSLSLPPK ENQDQAVGCN SFSTSPVTQL SFFPQQVKQS PRISSGNVST TYGDSPSTSP 240 VLSSKTRIRW NQDLHEKFVE CVNRLGGADK ATPKAILRMM CLDGLTIFHV KSHLQKYRIA 300 KYLPDTAEGK SEKRTTLNVE PQLDMKTGLQ IKEALQLQLD VQRRLHEQLE IQRNLQLRIE 360 EQGKQLKKMF DLQQKTSNDL FKTQNLDITC HEDAPSASLN AIQVSSPEDS GNSNFPSKIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G06800.1 | 3e-75 | G2-like family protein |