PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g989310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GATA
Protein Properties Length: 349aa    MW: 38171.3 Da    PI: 4.5299
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g989310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.32.8e-15203239135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++Cg+ +  Tp +Rrgp g++tLCnaCGl+++ kg+
  Pd.00g989310.m01 203 CQHCGVGEnnTPAMRRGPAGPRTLCNACGLMWANKGT 239
                       ****998888************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MAAVNPQPLQ ARPFEEHGRG PIPIEDDEAE YEDGGDDGME DMEEVHVNSV SVAERGGGGG  60
VVMASRTSEL TLSFEGEVYV FPAVTPEKVQ AVLLLLGGRD VPTGVPTVEV SYDQNTRGVA  120
DTPKRSNLSR RIASLVRFRE KRKERCFDKK IRYTVRKEVA QRMLRKNGQF ASLKQNSGDS  180
GWDSAQSGLQ DGTSRPETVL RRCQHCGVGE NNTPAMRRGP AGPRTLCNAC GLMWANKGTL  240
RDLSKGGRNL TMDHIEPGTP IEVKPLLVEG EFSGNQDEHE TLEGPSKTVI ERSNDASVNL  300
DEQDLHETAE DLTNSLPMGI VSSANDEQEP LVELTNPSDT DLDIPTNFD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126DTPKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-75GATA family protein