PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g983100.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NF-YC

Protein Properties

Length: 932aa MW: 104992 Da PI: 9.3499

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g983100.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	161.9	9.2e-51	2	96	8	102
NF-YC 8 kqiekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprde 100 ++ie+a+dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++rtd+fdflvdi+prde Pd.00g983100.m01 2 QDIEQASDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEIFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDE 94 579*****************************************************************************************8 PP NF-YC 101 lk 102 lk Pd.00g983100.m01 95 LK 96 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
MQDIEQASDF KNHSLPLARI KKIMKADEDV RMISAEAPVI FAKACEIFIL ELTLRSWIHT 60 EENKRRTLQK NDIAAAISRT DVFDFLVDII PRDELKEEGL GVTKATIPVV GSPADIPYYY 120 VPQQHPVGAP GMIMGKPVDQ AAIYAAQQPR PPMAFMPLGQ FLQSEHMANQ KPPKEDFSLK 180 ETSPNISGRR VSTGPMTAFD LVEHMQYLYV RVVKARGLPA IADPYVELKL GNYRAITRPM 240 VKNPNPEWNQ VFAFSKDRIQ VVSVEILVKD KAVVAEGGDH RTIGKFAFAL VEAPTRVPPD 300 SPLAPQWYTL EDKNKARIGG ELMLSFWIGT QADEAFPEAW HADVAAVSGD GVSSTRSKVY 360 LSPRLWYMRV NVIQAQDLVL KDKNKKTSEF FVKAQFGNLI LRSGVSPNKT VNPTWNEDLM 420 FVVAEPFDDP LVVSVEEKLN NNKEESMGRI VVPLGDVAKR NDAAAAAPKW YNLGMVEVVA 480 GVQKEVKFAS KVQMRVSLDG GYHVLDEPAH STSDLRPTAK ILWKPPIGVL ELGILNATGL 540 SPMKPKNQVD AYCVAKYGMK WVRTRTVVDS LSPKWNEQYT WEVYDPCTVI TIGVFDNGNL 600 QDKAAMDLSI GKVKIRLSTL ETDRIYTHSY PLAALQPSGV KKMGEIQLAV RFSCPNMLNL 660 LQLYSQPLLP KMHYVLPLSI YQLASLRHQA ALILWLRLSR AEPPLRKEVV DCMLDATAHL 720 WSFRRGKANF DRIIKLFDGL VALFKWFDQI RKWTNPLASA LVYITFVFVL CQPGLTIAAA 780 FLCLSFRGAL NYRKRPRQIA HIDTELSHAY DVHPEDLDEE FDSFPSKKTG DVLKRRYDRL 840 RGIAGRIQAV LGDIATQGER VQSLLSWRDP RATALFVIFC LIVGIVFCVV PAWWLALFAG 900 TYVMRPPYWR INIPTFPQNF LRRMPAKSDS IL

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

MQDIEQASDF KNHSLPLARI KKIMKADEDV RMISAEAPVI FAKACEIFIL ELTLRSWIHT  60
EENKRRTLQK NDIAAAISRT DVFDFLVDII PRDELKEEGL GVTKATIPVV GSPADIPYYY  120
VPQQHPVGAP GMIMGKPVDQ AAIYAAQQPR PPMAFMPLGQ FLQSEHMANQ KPPKEDFSLK  180
ETSPNISGRR VSTGPMTAFD LVEHMQYLYV RVVKARGLPA IADPYVELKL GNYRAITRPM  240
VKNPNPEWNQ VFAFSKDRIQ VVSVEILVKD KAVVAEGGDH RTIGKFAFAL VEAPTRVPPD  300
SPLAPQWYTL EDKNKARIGG ELMLSFWIGT QADEAFPEAW HADVAAVSGD GVSSTRSKVY  360
LSPRLWYMRV NVIQAQDLVL KDKNKKTSEF FVKAQFGNLI LRSGVSPNKT VNPTWNEDLM  420
FVVAEPFDDP LVVSVEEKLN NNKEESMGRI VVPLGDVAKR NDAAAAAPKW YNLGMVEVVA  480
GVQKEVKFAS KVQMRVSLDG GYHVLDEPAH STSDLRPTAK ILWKPPIGVL ELGILNATGL  540
SPMKPKNQVD AYCVAKYGMK WVRTRTVVDS LSPKWNEQYT WEVYDPCTVI TIGVFDNGNL  600
QDKAAMDLSI GKVKIRLSTL ETDRIYTHSY PLAALQPSGV KKMGEIQLAV RFSCPNMLNL  660
LQLYSQPLLP KMHYVLPLSI YQLASLRHQA ALILWLRLSR AEPPLRKEVV DCMLDATAHL  720
WSFRRGKANF DRIIKLFDGL VALFKWFDQI RKWTNPLASA LVYITFVFVL CQPGLTIAAA  780
FLCLSFRGAL NYRKRPRQIA HIDTELSHAY DVHPEDLDEE FDSFPSKKTG DVLKRRYDRL  840
RGIAGRIQAV LGDIATQGER VQSLLSWRDP RATALFVIFC LIVGIVFCVV PAWWLALFAG  900
TYVMRPPYWR INIPTFPQNF LRRMPAKSDS IL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	65	71	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	7e-69	NF-YC family protein