PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g972720.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 336aa MW: 36291.2 Da PI: 9.4129

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g972720.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.4	3.3e-25	97	141	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep rCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ Pd.00g972720.m01 97 DPEPTRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVEA 141 79****************************************986 PP
2	QLQ	50.6	5.8e-18	25	61	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Qlq+L+ Q+l+++y++a++ vPpeLlq+i+k Pd.00g972720.m01 25 SYFSFSQLQELELQALIFRYMLAGAAVPPELLQPIRK 61 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 336 aa Download sequence
MISTLSAFSE STPASASTRL PKMGSYFSFS QLQELELQAL IFRYMLAGAA VPPELLQPIR 60 KSLLHSPPYF LHHPLQQYPH FQPALLQSGY WGRAAMDPEP TRCRRTDGKK WRCSRDVVAG 120 QKYCERHVHR GRNRSRKPVE ATTAGGGGGT SDIATNTTTK TSSGGAHFTL SGSSSSPSID 180 LLHLNQSSSE SKAENRSLFE PHSEVSGSAK SDSHVLRPFF DDWPGKLQEL DNARTNAGSM 240 NSATSLSISI RGNSSSDVSL KLSTGNGVET GRQDGHAERE QPQLNWPAGW GTNQMASMGG 300 PLAEALRSSS NSNSSPTSVL HQLPRSSASE TSFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	6e-76	GRF family protein