PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g970640.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 477aa    MW: 54954.2 Da    PI: 7.7667
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g970640.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.41.7e-1642123290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA++vGF +r+ +s+ks+r+g+i++r + C     + ++         ++  +r  C+a++ +++ek g w+v+k+ ++HnH+l+
  Pd.00g970640.m01  42 FYDDYASRVGFLTRVLSSRKSERDGSIISRGLGCRGVSDNGRKV-------MQECGQREFCTAMVLLRQEKPGSWVVKKFLKDHNHPLV 123
                       9*********************************8666655544.......4589999*****************************96 PP
2FAR179.56.1e-25305395291
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                        Y+ Y++++GF++r++++++s +++ i+ r+fvCskeg+r+e+    +++r   +r+ tr gC+a+l+++ ++ gkw+++ +++eHnHel+p
  Pd.00g970640.m01 305 LYEMYGRHIGFTIRNNRTRRSLKDNAIIGREFVCSKEGFRAEKYAM-SQNRVlpSRPATRKGCNAMLRITAKDGGKWVIYGFVKEHNHELNP 395
                       7********************9********************9887.33333459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    
MDDQNGTIYT SEGGETNIVE VSTNQEPYEG MLFESEDAAR VFYDDYASRV GFLTRVLSSR  60
KSERDGSIIS RGLGCRGVSD NGRKVMQECG QREFCTAMVL LRQEKPGSWV VKKFLKDHNH  120
PLVVQSQKSR RTLHPSCVLL RELSLDEKDK KIQELTAQLR VKKRLSAAYR EQLLAFMKDV  180
EDHNNHLSIK VQSVFENLKV LEAKAFTKIS DCRTQKNAKI ILGFQFLLLA RLMMASTSGQ  240
GFSPERNYRC WLDETFSSHE TADDELSYTP DVDNNLIETS SQDFSLSLEP VIGMEFESAE  300
DARDLYEMYG RHIGFTIRNN RTRRSLKDNA IIGREFVCSK EGFRAEKYAM SQNRVLPSRP  360
ATRKGCNAML RITAKDGGKW VIYGFVKEHN HELNPNKIPP RRSHRIVFCE DEKDLKIREL  420
STELHREKKK SAAYQEKLQI VLKYIEEHTQ RLSLKVELAT NNMRELESEE QDSSYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.13e-53FAR1 family protein