PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g968580.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 323aa    MW: 36021.2 Da    PI: 6.7901
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g968580.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.81e-071449148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +lv +++++G            ++R+ k+c++rw +yl
  Pd.00g968580.m01 14 KGPWTPEEDIILVSYIQEHG------------LHRCSKSCRLRWTNYL 49
                      79******************............469999******9997 PP
2Myb_DNA-binding48.42.1e-1555100148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T  E++ ++++ ++lG++ W++Ia++++  Rt++++k++w+++l
  Pd.00g968580.m01  55 RGNFTDHEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 100
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ EHGLHRCSKS CRLRWTNYLR PGIKRGNFTD  60
HEEKMIIHLQ ALLGNRWAAI ASYLPQRTDN DIKNYWNTHL KKRLNKLQAG TEGHSKDQGS  120
STSSQAISRG QWERRLQTDI HMARQALRDA LSPEKPSTLS SDLKPADGFL ISTTKPAQDQ  180
STATYASSTE NISRLLKGWM KNPPKSSSAR TNLAKTQHSF TNMVSGFDCT SSEGATSAAN  240
TTSGVELSDA FESLFGFESL DYSNSDLSPS MSPEASLFQD ESKPTLTSDQ FLSLIDKWIF  300
DEDAAAIQGK DMMTLDHENA NFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-100MYB family protein