PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g968260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 166aa MW: 18830 Da PI: 4.3166 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.3e-18 | 16 | 67 | 1 | 51 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kv 51 lppGfrFhPtdeel+++yL +kv ++ + + ++i evd++k+ePwdLp k k+ Pd.00g968260.m01 16 LPPGFRFHPTDEELISHYLSPKVLDSCFCA-RAIGEVDLNKCEPWDLPwKaKM 67 79************************9888.89**************943233 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MENASGFSKE DEQMELPPGF RFHPTDEELI SHYLSPKVLD SCFCARAIGE VDLNKCEPWD 60 LPWKAKMASS SRSNPSAHLN PIYSNQITPN IGFLQYQDSV LMQDQSFLRM LLENQAPNLR 120 RSAKTELSQD TGLSMDVSSV VSNREMVQDD PSYSSAPIEF DSLWNY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 2e-33 | NAC family protein |