PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g966810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 340aa    MW: 38908.2 Da    PI: 8.4617
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g966810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2838.6e-87133938374
              GRAS  38 mqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlq 130
                       mqRlaa f+ ALa rl+++++++ kal+  ++++k + +++++  +f +++P+l f++ +  +++l+a++ e+ +Hi+D++   +  W++Llq
  Pd.00g966810.m01   1 MQRLAARFASALAVRLVKNWPGIHKALNYDTKRPKLELDRAHV--IFTKAFPYLGFAYAIIARTLLQAMSAERVIHIVDLGSADPKLWAPLLQ 91 
                       8********************************9888888777..7*********************************************** PP

              GRAS 131 aLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll......... 214
                       ++a+ p+g+p+l+iT v+     +k  l+++g +L k Ae+l++pf++n+l   +l +l+ ++L+v++gEal   ++l++h ll         
  Pd.00g966810.m01  92 SFAALPDGAPHLKITCVHG----NKAVLKKLGPKLVKEAEALDMPFQYNPL-NVSLRELTKDMLKVRSGEALGFVSILNIHVLLaqddqvdtq 179
                       *******************....99*************************5.889************************************** PP

              GRAS 215 ......desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak...lpreseerikvErellgreivnvv 298
                             + +v+  ++ +e+L +v+s+sPkvv +veqea hn + +++rf+e l+yys++fdslea+   l++ seer ++E++ +grei+n+v
  Pd.00g966810.m01 180 frpkksNIDVKDCKQMSEFLGMVRSMSPKVVLLVEQEAHHNLNHLVDRFIEGLHYYSTIFDSLEASfggLSSSSEERFVLEEM-FGREIENIV 271
                       ***966444555557899**********************************************9933344555999999999.********* PP

              GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       a egaer+erhe+++ W  r+ e+GFkpv+l  + +++ k        +gy++ +++ sl+++W++rpL++vSaW+
  Pd.00g966810.m01 272 AWEGAEREERHERYAWWMVRFCEVGFKPVRLWLDSMEDSK--------KGYKIISQRTSLMICWNERPLYTVSAWT 339
                       *******************************999998875........79*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MQRLAARFAS ALAVRLVKNW PGIHKALNYD TKRPKLELDR AHVIFTKAFP YLGFAYAIIA  60
RTLLQAMSAE RVIHIVDLGS ADPKLWAPLL QSFAALPDGA PHLKITCVHG NKAVLKKLGP  120
KLVKEAEALD MPFQYNPLNV SLRELTKDML KVRSGEALGF VSILNIHVLL AQDDQVDTQF  180
RPKKSNIDVK DCKQMSEFLG MVRSMSPKVV LLVEQEAHHN LNHLVDRFIE GLHYYSTIFD  240
SLEASFGGLS SSSEERFVLE EMFGREIENI VAWEGAEREE RHERYAWWMV RFCEVGFKPV  300
RLWLDSMEDS KKGYKIISQR TSLMICWNER PLYTVSAWTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.19e-84GRAS family protein