PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g961660.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 235aa MW: 26557.2 Da PI: 9.655 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.3 | 3.5e-08 | 14 | 51 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q G++ + R++k+c++rw +yl Pd.00g961660.m01 14 RGQWTPEEDNKLSSYIAQRGTR--------L--QRCGKSCRLRWTNYL 51 89******************99........4..5************97 PP | |||||||
2 | Myb_DNA-binding | 44 | 5.1e-14 | 58 | 100 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ E++ +v+++ G++ W+ Ia+ ++ gRt++++k++w++ Pd.00g961660.m01 58 GQFSDAEEQTIVKLHSVVGNR-WSIIAAQLP-GRTDNDVKNHWNT 100 7899*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QRGTRLQRCG KSCRLRWTNY LRPDLKHGQF 60 SDAEEQTIVK LHSVVGNRWS IIAAQLPGRT DNDVKNHWNT KLKKKLSGMG IDPVTHKPFS 120 HLMAEIATTL APPQVAHLAE AALGCFKDEM LHLLTKRRID FQFQHSNATP GNSTATYINS 180 KQEEKDDTIE KIKIGLSRAM QEPDMLTSNK PWDPTGATSA NFTRDLYSIA QPKNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56110.1 | 1e-108 | MYB family protein |