PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g959360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 381aa MW: 42529.8 Da PI: 4.3878

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g959360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.5	3.5e-25	10	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lp+Gf+F+P+d++l+ +yL +kv+g+++ e+vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r+ r++ sg+Wk + Pd.00g959360.m01 10 LPVGFKFRPRDDQLLGYYLLNKVRGTSFMYENVIPEMDLYgKIEPWDIWHeyggHNLAKGEDLYFFTKLKSLSDKDSRAARTIGSGTWKGENS 102 79***********************99999**99568*742444222366799**********************9999 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v + k+++ g+ k + + + ++ + W+mhey+l Pd.00g959360.m01 103 GTTVSDPenKENDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 142 99999886566779999999886..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MAPCEFAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE 60 YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGIWK 120 RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE 180 TGTLVQSQNK RQSPQQVTSF EELIGDCTPM SDATGVGGSV SYLPTGLTQS QPDSSFAYPT 240 TVVSSQARAN YTDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY 300 ETQQGLVLTD NNIGYWPSPF GSEEDQVNAF DFSIDYDLLN HLIDCDDDND GPRQSSTAQF 360 MGMGMENTTT ASSEANMVIM D

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MAPCEFAVNL PVGFKFRPRD DQLLGYYLLN KVRGTSFMYE NVIPEMDLYG KIEPWDIWHE  60
YGGHNLAKGE DLYFFTKLKS LSDKDSRAAR TIGSGTWKGE NSGTTVSDPE NKENDLGIWK  120
RFHYENPKSV QDGCWIMHEY SLHPSLVKPK PNSTNQFVLC RIRKNDRGKR KLRTAEEDNE  180
TGTLVQSQNK RQSPQQVTSF EELIGDCTPM SDATGVGGSV SYLPTGLTQS QPDSSFAYPT  240
TVVSSQARAN YTDDVSQFHG GGDGDALMSD FSHSDTAQPF TEQALGSYAV CNQERASDVY  300
ETQQGLVLTD NNIGYWPSPF GSEEDQVNAF DFSIDYDLLN HLIDCDDDND GPRQSSTAQF  360
MGMGMENTTT ASSEANMVIM D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	167	173	RGKRKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	1e-18	NAC family protein