PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g952720.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 121aa    MW: 13327.3 Da    PI: 7.5812
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g952720.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC110.59.3e-35231021997
             NF-YC  19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 
                       h+lPlarikki+k + edvkmis eaP+++skacelfi elt rsw+ + e krrtl+k d+a+av  tdifdflv  v 
  Pd.00g952720.m01  23 HSLPLARIKKIMKkSGEDVKMISGEAPIVFSKACELFIEELTRRSWMTTLEGKRRTLHKDDVASAVVGTDIFDFLVSLVS 102
                       99**********73579**********************************************************98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    
MRQPGRYSGF MMHGGISGRT GPHSLPLARI KKIMKKSGED VKMISGEAPI VFSKACELFI  60
EELTRRSWMT TLEGKRRTLH KDDVASAVVG TDIFDFLVSL VSDSCHSEDI TPEEKEALGG  120
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.31e-35NF-YC family protein