PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g952520.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 753aa MW: 84367.6 Da PI: 8.3899 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.3 | 5.5e-16 | 58 | 102 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd+ll ++v+++ +Wk Ia++++ gRt+ qc rwqk+l Pd.00g952520.m01 58 CWTEEEDDLLGELVRKFNRSNWKEIAACLP-GRTDVQCLQRWQKVL 102 6*****************99**********.************986 PP | |||||||
2 | Myb_DNA-binding | 58.3 | 1.8e-18 | 108 | 154 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ +++ v+ +G ++W+ Ia+ ++ gR +kqc++rw+++l Pd.00g952520.m01 108 KGPWTKEEDDCIIKQVESHGAKRWSVIAKFLP-GRMGKQCRERWYNHL 154 79******************************.*************97 PP | |||||||
3 | Myb_DNA-binding | 41.9 | 2.4e-13 | 160 | 202 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT+eE+ l +++++G++ W+ Iar + gRt++ +k++w+ Pd.00g952520.m01 160 RNAWTEEEEWVLTYYHQLFGNK-WAEIARFLT-GRTDNAIKNHWN 202 789*******************.********9.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 753 aa Download sequence |
MAKVKKEQLQ EVVVDPYEKM GFLLQALYET EGCFDSPASK PSSATRRATG PMRRSAKCWT 60 EEEDDLLGEL VRKFNRSNWK EIAACLPGRT DVQCLQRWQK VLNPEIVKGP WTKEEDDCII 120 KQVESHGAKR WSVIAKFLPG RMGKQCRERW YNHLCPAINR NAWTEEEEWV LTYYHQLFGN 180 KWAEIARFLT GRTDNAIKNH WNCTLKRKLD SYSPNGCDVD MHPHVWNGEL RSGHVEINPA 240 GQISDRLASL NQRTGLEIGD IACSTELTLG CSYRHELCSE WKPVKVQKCR SSDRGANNLT 300 NLITSGSSKH SPLSASSSVF VGASASTRSS PFESPSCYST PQSRAQNVNV NLSSGSSPGS 360 RLKNLALSFK NTPSIIRKRS SRRPDASSAA VKSLGRCLER EFDAENDSGV TKCGQLFSAY 420 ATSSDVNLLE AGFRVSILDN LDNSVIEAVD RVRDLVGPKL SQKLHFHLGD LRNKDDLERL 480 FSQTKFDAVI HFAGLKAVGE SVAHPRRYYD NNLVGTINLY EVMTKYNCKK MVFSSSATVY 540 GQPSKIPCVE DFDLVALNPY GRTKLFLEEI ARDIHIADPD WQIILLRYFN PVGAHESGQI 600 GEDPKGIPNN LMPYIQQVAV GRLPELNVYG HDYPTKDGTA IRDYIHVMDL ADGHIAALQK 660 LFTTENLGCV AYNLGTGQGT SVLQMVAGFE KASGKKIPIK LCPRRPGDAT AVYASTEKAE 720 RELGWKAKYG IEEMCRDQWK WAVNNPRGYQ SKY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G32730.1 | 2e-71 | MYB family protein |