PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g951900.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 484aa MW: 54384 Da PI: 7.8065

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g951900.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	309	355	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr+++P+ K++ ++ L Av YI++L+ Pd.00g951900.m01 309 NHVEAERQRREKLNHRFYLLRSVVPNV-----SKMDRSSLLADAVAYINQLK 355 799*********************6.....5***************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD 60 FQVNSDLASK RNNKVTNNHQ PKFGFNKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE 120 WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL 180 VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN RDSQQKGGRE GNVLAPLLEN 240 GIFSGSQKKL TRQAAGTKEA ARFNIGGSSP ESLSGSVGNF TCENTENTRS KKRRRSSNNG 300 ASRESSLLNH VEAERQRREK LNHRFYLLRS VVPNVSKMDR SSLLADAVAY INQLKAKVEE 360 LELKTQAQPQ NPKRVSVNNL DNQCSQSTSS IVDHHSSYNN TKVVPVEVDV KIMGSEAIIR 420 VQCPDQDYPY ARLMNALKGL GLQVYHASIS SVKELMIQDV VARVPYGFTS EEAMRIGIIK 480 RWHN

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MEAIISSCSS PNFCQENLGT FQQRLQFIFQ NRPEWWVYSI FWQPSKDSND QVSLSWAAGD  60
FQVNSDLASK RNNKVTNNHQ PKFGFNKKVT SREAEEALFD EDMVDLEMRL VDHGDVTGSE  120
WFYFYSVSLT QSFAAGHATN NILGRAFCSG GFVWLAGAHE LQFYECERVK EARMHGIQTL  180
VCIATPYGVL ELASLDVIKE DWGFVHLSKS LFGSDNNNNN RDSQQKGGRE GNVLAPLLEN  240
GIFSGSQKKL TRQAAGTKEA ARFNIGGSSP ESLSGSVGNF TCENTENTRS KKRRRSSNNG  300
ASRESSLLNH VEAERQRREK LNHRFYLLRS VVPNVSKMDR SSLLADAVAY INQLKAKVEE  360
LELKTQAQPQ NPKRVSVNNL DNQCSQSTSS IVDHHSSYNN TKVVPVEVDV KIMGSEAIIR  420
VQCPDQDYPY ARLMNALKGL GLQVYHASIS SVKELMIQDV VARVPYGFTS EEAMRIGIIK  480
RWHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	6e-58	bHLH family protein