PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g951770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 588aa    MW: 65503.5 Da    PI: 6.0168
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g951770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.51.8e-1292195872373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       + lL++cA a+s+++    ++l+++ +  +s +g+p+qRl ay++e+L ar   s+ ++y+al+++e +   s++ l+++++++e++P+lkf+
  Pd.00g951770.m01 219 KALLIACAGALSDNNIDSFDKLIEKARGAVSVSGEPIQRLGAYLVEGLVARKEASGANIYRALRCREPE---SDDLLSYMQILYEICPYLKFG 308
                       689*****************************************************************9...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       +++aN aI ea  +e+r+HiiDf+i qG+QW++LlqaLa+Rp+g+p++RiTg+++p s+  + + le++g+rL+ + e++++p+ef+  v   
  Pd.00g951770.m01 309 YMAANGAIAEACRNEDRIHIIDFQIAQGTQWVTLLQALAARPGGAPHVRITGIDDPLSQyaRGDGLEAVGKRLKAISEKFNIPVEFHG-VPVF 400
                       *******************************************************9998999**************************.6888 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                         d++ ++L+v++gEalaVn+ lqlh+++desv+ +++rd +L++vkslsPkv ++veqe+++n+++F++rf+e+leyy a+f+s++++lpr+
  Pd.00g951770.m01 401 APDVTQDMLDVRHGEALAVNFPLQLHHTPDESVDENNPRDGLLRMVKSLSPKVTTLVEQESNTNTTPFFNRFVETLEYYLAMFESIDVTLPRN 493
                       999****************************************************************************************** PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                       ++eri+vE+++l+r+ vnv+aceg+er+erhe ++kW++rl++aGF+++pls+++++ +++llr ++ + y++ e++g+++lgWkdr+L+s+S
  Pd.00g951770.m01 494 NKERINVEQHCLARDMVNVIACEGKERVERHELFGKWKSRLTMAGFQQYPLSSYVNSVIRSLLRCYS-EHYTLVERDGAMLLGWKDRNLISAS 585
                       ***************************************************************9999.66*********************** PP

              GRAS 372 aW 373
                       aW
  Pd.00g951770.m01 586 AW 587
                       ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 588 aa     Download sequence    
MDSHQHFGFG VTGAGFSYAA PHSTVPSLPT RLLGSLKFDI GNSPNSPFST HFDSDTLTTL  60
SDGQEQHSST ENLSGASPSC NSSFETNSYI HQLSFSPSVD CRRDSLQLYS GRSSLLQNAN  120
SSQNIKHALQ ELESTLMGPD NEEEEVTTPN TSFGESSKRQ TQRSTSWIQE IQEHQGSPVV  180
QRQTSFVSRQ RQLCEFQIEK RHKVIDEGSL KGLPAGNLKA LLIACAGALS DNNIDSFDKL  240
IEKARGAVSV SGEPIQRLGA YLVEGLVARK EASGANIYRA LRCREPESDD LLSYMQILYE  300
ICPYLKFGYM AANGAIAEAC RNEDRIHIID FQIAQGTQWV TLLQALAARP GGAPHVRITG  360
IDDPLSQYAR GDGLEAVGKR LKAISEKFNI PVEFHGVPVF APDVTQDMLD VRHGEALAVN  420
FPLQLHHTPD ESVDENNPRD GLLRMVKSLS PKVTTLVEQE SNTNTTPFFN RFVETLEYYL  480
AMFESIDVTL PRNNKERINV EQHCLARDMV NVIACEGKER VERHELFGKW KSRLTMAGFQ  540
QYPLSSYVNS VIRSLLRCYS EHYTLVERDG AMLLGWKDRN LISASAWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-178GRAS family protein