PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g948800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 376aa MW: 41852.2 Da PI: 4.3442

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g948800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77	4.3e-24	10	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lp+Gf+F+P+d++l+ +yL +kv g+++ ++vi+e+d+y k+ePwd+ + + a+ +++yfF+k ++ + +++r r++ sg+Wk Pd.00g948800.m01 10 LPVGFKFRPSDDQLLGYYLLNKVCGTSFMYDNVIPEMDLYgKIEPWDIWHeygghNNLAKGEDLYFFTKLKSLSDKDSRVARTIGSGTWKGEN 102 79************************99999*99568*7434443222356789**********************998 PP NAM 88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + v + ++++ g+ k + + + ++ + W+mhey+l Pd.00g948800.m01 103 SGTVVSDPkiEESDLGIWKRFHYE--NPKSVQDGCWIMHEYSL 143 877776667778889999999887..566667999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MAPCESVVNL PVGFKFRPSD DQLLGYYLLN KVCGTSFMYD NVIPEMDLYG KIEPWDIWHE 60 YGGHNNLAKG EDLYFFTKLK SLSDKDSRVA RTIGSGTWKG ENSGTVVSDP KIEESDLGIW 120 KRFHYENPKS VQDGCWIMHE YSLHPSLVKP KPNSTNQFVL CRIRKNDKGK RKLRTADEDN 180 ETDTPVQSQN KSQRPQQVTS FEELIGNCTP VSEAIGVGGS VSYLPTELTQ SQPDSSFAYP 240 TTVVSSQARA NYTDDVSQFH SGGDGDALMS DFSHLDTAQP FTEQALGSYA VCNQERASDV 300 YETQQDLGLT DNNIGHWPSP FGSEEDQVNA LDFSIDYELL IHLINCDDGP PQSSTAQFMG 360 MENTTASSEA NMVIID

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MAPCESVVNL PVGFKFRPSD DQLLGYYLLN KVCGTSFMYD NVIPEMDLYG KIEPWDIWHE  60
YGGHNNLAKG EDLYFFTKLK SLSDKDSRVA RTIGSGTWKG ENSGTVVSDP KIEESDLGIW  120
KRFHYENPKS VQDGCWIMHE YSLHPSLVKP KPNSTNQFVL CRIRKNDKGK RKLRTADEDN  180
ETDTPVQSQN KSQRPQQVTS FEELIGNCTP VSEAIGVGGS VSYLPTELTQ SQPDSSFAYP  240
TTVVSSQARA NYTDDVSQFH SGGDGDALMS DFSHLDTAQP FTEQALGSYA VCNQERASDV  300
YETQQDLGLT DNNIGHWPSP FGSEEDQVNA LDFSIDYELL IHLINCDDGP PQSSTAQFMG  360
MENTTASSEA NMVIID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08790.1	9e-20	NAC family protein