PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g946970.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 1037aa MW: 117215 Da PI: 5.954 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 99.3 | 5.7e-31 | 55 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........ 77 lp+G++F+P+d el+ e+L++k+ + + ++e+i+++d iy+ +P +Lp k++ ++ +fF+k+ ++yatg+rk+r+ Pd.00g946970.m01 55 LPAGVKFDPSDAELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdchrsla 145 799************.999999876664555444456777766677**********.556778899******************868888888 PP NAM 78 tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +++ +W++tgk+k++++ +g ++g+kk++v+y +++ +k+ k++Wvmh+y+l Pd.00g946970.m01 146 AEHVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 197 77999************.999***********4334667888*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1037 aa Download sequence |
MARAWLINSR GLANKVKNAA RSSAYQIKDC GANRDCPNCH FVIDNSDVLS EWPGLPAGVK 60 FDPSDAELLE HLAAKCGVGN SKPHMFIDEF IPTLDGDNGI YYDHPANLPG SKNDGSSFHF 120 FHKTINAYAT GHRKRRKVDC HRSLAAEHVR WHKTGKTKPI MENGVQKGCK KIMVLYKSSK 180 KGSKADKSNW VMHQYHLGTE DGEKEGEYVV SKIFYQQHKQ SETNDNNLVI EDDVNALGTS 240 PRTPITSAPN PPRPGKSVGC DDVPDEDVLH SSAKEAELVP GTQFEDNAVD TTWLAGESQA 300 DENCDLDCLE DTLLCKETFD SSTLLNGSFV DRISSTDFPS NIYGVTGNSS TLCGIGDLEN 360 IDLGTPPDFQ LADLQFGSQD SLLGWLDRNV FLLRDVSAKL LSSNVVQPSK PSEDCFFSSS 420 TPSNPFDGWC RSMSTSRGSS SRGSSMRSKV AKRMQKESGK TLREVRRAKK LQKKLMTENE 480 RLIYNLKRAK RKVALLLQKL KKYELPDLPA PRHDPELLTL EQLQAFKKIG FRNKNYVPVG 540 VRGVFGGVVQ NMHLHWKFHE TVQVCCDNFP KEKIKEMATM LARLSGGVVI NIHNVKTIIM 600 FRGRNYRQPK NLIPFNTLTK RKALFKARFE QALESQKLNI KKIEQELRRS GVNPEDPVAI 660 ASIQRVASSF FNAIDQKDGS PYVFRGDKLS AAEPDNKLKH SDPPDEEEEE ELDKFIAEIE 720 DAAEREWAAE EAAEKEEQSR LRYWNKEQFG GRYRRSEDVE NDDSDDETTR ARGWRDTHGK 780 QRPNDSDYED DEEESDSSNV VDASVLDSDA DDSDGKPEKF KVSTRDRAKQ DKFGRAKNDE 840 RFKKNHEVNN TKASSRKIIV DEGTESENML SDLDTVMWKS DSEEEHDSTA SRAVNYDFRS 900 SGDEEEDLSY RRGERKKLAN DLDKGHDKFE VSRNAQGKHH RIGRADNNDY LKRNGDVNVR 960 RKLVEEDVVS ENTFGASESA IWELEAVEDV GAPTAGRHNY KSSDEEDYQV RRVEKKVKDT 1020 NKSTRTTKEL DEDWDSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 3e-88 | NAC family protein |