PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g939160.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 222aa    MW: 24400.7 Da    PI: 6.4263
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g939160.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof49.77.9e-163866230
            zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPr 30
                      ++++l+cprC+stntkfCyynnysl+qP 
  Pd.00g939160.m01 38 PQEQLNCPRCNSTNTKFCYYNNYSLTQPS 66
                      6899************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MDTAQWPQES GELDKPMEDH EMGSNACPRS ALEKRARPQE QLNCPRCNST NTKFCYYNNY  60
SLTQPSLSHF SAHQNPRSTH EGQDLNLAFN AMEHYQQNPA AGASTSSSAP LSAMELLRTG  120
IASRGVNSFI PNQNMADHSN TLYASSPGFS LQEFKPNLGF CVDGLGNRYG DHEINGGRLL  180
FPFGDLKQIS SSTAHHELDH HQNKGQGNPT GYWNGLLGGG SW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.22e-30Dof family protein