PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g938080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 422aa    MW: 48471.3 Da    PI: 6.3532
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g938080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM129.52.5e-40321591128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                       lp G+rF Ptd elv+ yL+ kv +k+++  + + ++di  ++P+dL  + +  +e+ewyfF++r++ky++g+r+ r++ +g+Wkatg+ +++
  Pd.00g938080.m01  32 LPCGYRFAPTDAELVSSYLEGKVLNKEIPK-NRFLDLDISLYHPRDLTgRFTLIRESEWYFFTSRKRKYPRGQRPDRSAVDGFWKATGRAQDI 123
                       699*************************99.67999***********9444445889********************99************** PP

               NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        +++g+++g k+tL fy+g+++++++t+W mhey+l
  Pd.00g938080.m01 124 EDSNGKVIGSKRTLDFYQGNHQDSKRTEWKMHEYTL 159
                       **********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    
MEENNRFINN PIPDQVDLFI NDPTNDAYFN SLPCGYRFAP TDAELVSSYL EGKVLNKEIP  60
KNRFLDLDIS LYHPRDLTGR FTLIRESEWY FFTSRKRKYP RGQRPDRSAV DGFWKATGRA  120
QDIEDSNGKV IGSKRTLDFY QGNHQDSKRT EWKMHEYTLD TQTAPPNEIS NTRVTQLDNC  180
VLCKIYKNTK DGNNDSSTTQ SDQRAEPSTN VVASQAFPDQ QIQPVHQHDQ YLVGQSSGAS  240
SSSTANKRPR GMATPTIFMN TYVGNPTYYP HQQYPFQNQT SGNPPGPVYN NYQNLTQYNQ  300
NDQNLTQYGQ NDQNLTQYDQ NDQNLTQSDM QSANIESHVQ PRESFSSQPG FLPPMETSTY  360
ADQMPLVDSS SMQLPVHVRL YEQLLAARIK DGGLDKRLER WYHHQQQLFR QNPSSTPNCK  420
LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-36NAC family protein