PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g931760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 752aa    MW: 81855.1 Da    PI: 6.5084
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g931760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS328.61.2e-1003887512374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        ++L+++Ae v +g+++ aq +Larl+++ sp g+p+qR+a+yf+eAL+  l+ + + +  + pp++ ++ +++ ++ a+k+fsevsP+++f 
  Pd.00g931760.m01 388 LDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPAT--SPPPRTPTPFDVIFKMGAYKVFSEVSPLIQFV 478
                       679**************************************************955554..57888999999********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++t+Nqa+leav+  +++Hi+Dfdi+ G++W++++q+L  R+  + +pslRiT+++sp++++  el  ++++L++fA+e+g++fe +v+  ++
  Pd.00g931760.m01 479 NFTCNQALLEAVSDTDQIHIVDFDIGFGAHWASFMQELPVRNrgATAPSLRITAFASPSTHHPVELGLMRDNLTQFANEIGISFELEVVNFDS 571
                       ***************************************999556699****************************************98887 PP

              GRAS 186 ledl..eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       l++   +l  +r + +E++aVn+ +   ++ +++++l++    +L++vk+lsPk++v  ++ +d+++ +F +++ +al+ y  l++sl+a   
  Pd.00g931760.m01 572 LDQSsySLPIFRANDNETVAVNFPI--WSTSNQPAALPN----LLRFVKQLSPKIMVSLDRGCDRSDLPFPQHIQQALHSYINLLESLDAV-N 657
                       777622444567777********99..666678999999....*********************************************665.5 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                        +s++ +k+Er+ll+++i++ v  + ++      ++  W+  + +aGF+pvp+s+++++qa++++++++ +g++ve+++++lvl+W++r+L+s
  Pd.00g931760.m01 658 VTSDAVNKIERFLLQPKIESTVLGRLRA----PDKMPLWKTLFASAGFTPVPFSNFTETQAECVVKRTPARGFHVEKRQEALVLCWQRRELIS 746
                       79*********************99998....999********************************************************** PP

              GRAS 370 vSaWr 374
                       +SaWr
  Pd.00g931760.m01 747 ASAWR 751
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    
MRRSPSPPTS ASTLSSSFNG GGGGGGDKTT PLAAETSPPV GPASTKDEWA CELQSIPSGG  60
LEAVTGSGGV ERCGLGLGGL EDWETMLTET AASPGQDQSL LRWIAGDVDD TSFGLKQLLQ  120
SGNQNGSNNN SNPLDFDGNA GLGIVDQGPG FDLIGSSVSG TSVSGPNFGF SSSGFVSNGN  180
NSSNGKVGFV PGSSGLLNYK VSTVGLMHNN NNGGGNSVNC NIQNPIFFNS SNTMALPVSL  240
PLGHVVYQQQ QFESSPDEKP QILNPQLFMN NPNQQSQLSQ NPNFFMPLAY AQQEQHHLLQ  300
SQAKRHNSGG IVDPGSHQIQ KVQFSDLGHE FLLRKHQQQQ QFGYPQGMQF LPQQHHVPQK  360
PLMVPKPKVA VGHGEEMAHQ QQLQHTLLDQ LYKAAELVGT GNFSHAQGIL ARLNHQLSPV  420
GKPLQRAAFY FKEALQLLLL MNNPATSPPP RTPTPFDVIF KMGAYKVFSE VSPLIQFVNF  480
TCNQALLEAV SDTDQIHIVD FDIGFGAHWA SFMQELPVRN RGATAPSLRI TAFASPSTHH  540
PVELGLMRDN LTQFANEIGI SFELEVVNFD SLDQSSYSLP IFRANDNETV AVNFPIWSTS  600
NQPAALPNLL RFVKQLSPKI MVSLDRGCDR SDLPFPQHIQ QALHSYINLL ESLDAVNVTS  660
DAVNKIERFL LQPKIESTVL GRLRAPDKMP LWKTLFASAG FTPVPFSNFT ETQAECVVKR  720
TPARGFHVEK RQEALVLCWQ RRELISASAW RC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-120GRAS family protein