PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g931180.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 457aa MW: 51989.1 Da PI: 4.202 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.5 | 1.1e-18 | 8 | 144 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv..ePwdLpk.....kvkaeekewyfFskrdkkyat.gk.rknratk..sg 81 +GfrF+Ptd+el++ +L k v +kk + +++i++++i+ + eP+++ + +++ +++e+yfFs+ ++ +++ g+ + nr++ g Pd.00g931180.m01 8 VGFRFRPTDQELITLFLYKMVVEKKalmATYDNIIRKFNIFGTefEPSEIWNgfggeQLHPHDQELYFFSELNTLSSKaGSrKINRKVGlgGG 100 7*******************99999785455567*****9855339****75466666666999******99887765344155776555599 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +W+ +v++++g+++g k+ + + + + + e++ W+++ey+l Pd.00g931180.m01 101 TWSGERC-DAVYDEEGNEIGHKRKFRYEN--EGSEEHSGWFLEEYSL 144 9*98766.678888************984..334469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 457 aa Download sequence |
MADSDDRVGF RFRPTDQELI TLFLYKMVVE KKALMATYDN IIRKFNIFGT EFEPSEIWNG 60 FGGEQLHPHD QELYFFSELN TLSSKAGSRK INRKVGLGGG TWSGERCDAV YDEEGNEIGH 120 KRKFRYENEG SEEHSGWFLE EYSLSGEGCA FDYVICRLRK NERLFGNKRK SSSSLSEHQY 180 PKKKMFTKPK PSLTTKGKKV KKDEQQMGSQ ENMNLEPQNY RSPSTLVVSD DEKGNNHFTY 240 NNHDDQFINN SNYFPDDNTM MINDIITLDD INTLDDAKMI FSDMEWPLPD LPQIVDQNHV 300 PLPASSGGAD SVDGVIEACE PSNLVNDNQM GNNNSDEDQD QLLNNTDYCP HDTLIFLGDS 360 DEEGYLINSP TIDDYMDELF PEIAGEWPLP QMPQMAATDE SQVPFPTSEV GAESTNGGEM 420 EAYCNPSHFQ NMGNYQPLEE DINCFSNYSF VDELKGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G02250.1 | 2e-09 | NAC family protein |