PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g931120.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ARF

Protein Properties

Length: 719aa MW: 79067.4 Da PI: 7.9818

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g931120.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.5	2.6e-23	112	213	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + Pd.00g931120.m01 112 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--R 200 89**************************996555555..8********************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ l+v+++r+ Pd.00g931120.m01 201 AENGDLCVGIRRA 213 488999**997 PP
2	Auxin_resp	117.3	1.3e-38	286	369	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++FevvY+Prast+eF+vk++ v++a++v+++ GmRfkmafetedss++++ +Gt+++v+ +dp+rWpnS+Wr+L+ Pd.00g931120.m01 286 AATMAANGQAFEVVYYPRASTPEFCVKASAVRAAMRVQWCSGMRFKMAFETEDSSRISWfMGTIASVQVSDPIRWPNSPWRLLQ 369 68899*****************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MRDSERSLDP QLWHACAGGM VHMPPVNSKV FYFPQGHAEH AQAHVDFSSA SLRIPSLILC 60 RVASIKFMAD PETDEVFAKI KLNPIENNEP FASDEAPMEA DGSENQEKPA SFAKTLTQSD 120 ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVIAKDVHGE IWKFRHIYRG TPRRHLLTTG 180 WSTFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGLDGA GGPELASGWN NSHGGGSGAC 240 VLPYGGFSVF LREEENKMVR NGGGNLSPNG NLRGKGRVRP ESVVEAATMA ANGQAFEVVY 300 YPRASTPEFC VKASAVRAAM RVQWCSGMRF KMAFETEDSS RISWFMGTIA SVQVSDPIRW 360 PNSPWRLLQV TWDEPDLLQN VKCVSPWLIE LVSNFPMIHM SPFSPPRKKL RLPQPDFTLD 420 GQLTLPSFSG NPLGPSSPLC CLPDNTPAGI QGARHAQFRI SLSDLHINNK LQSGLFQSSF 480 QRFDQNSRIS NGIRAGHTSS NENLSCLLTM GNSSQNSEKS DNVKKHQFLL FGQPILTEQQ 540 ISRSCSSVAV SQLLTGKDSK DGNQDRTKFL SDGSKSAHGM QVSLEKSSNA GFPCNKDFQG 600 SDFDLDTGHC KVFMESEDVG RTLDLSVLGS YEELYRRLAN MFGIEKPEML SHVLYRDVTG 660 AVKQTGVEPF SDFMKKAKRL TILTHPTGES IGRTWIRGMQ NAENGLGATN KTGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MRDSERSLDP QLWHACAGGM VHMPPVNSKV FYFPQGHAEH AQAHVDFSSA SLRIPSLILC  60
RVASIKFMAD PETDEVFAKI KLNPIENNEP FASDEAPMEA DGSENQEKPA SFAKTLTQSD  120
ANNGGGFSVP RYCAETIFPR LDYSADPPVQ TVIAKDVHGE IWKFRHIYRG TPRRHLLTTG  180
WSTFVNQKKL VAGDSIVFLR AENGDLCVGI RRAKRGLDGA GGPELASGWN NSHGGGSGAC  240
VLPYGGFSVF LREEENKMVR NGGGNLSPNG NLRGKGRVRP ESVVEAATMA ANGQAFEVVY  300
YPRASTPEFC VKASAVRAAM RVQWCSGMRF KMAFETEDSS RISWFMGTIA SVQVSDPIRW  360
PNSPWRLLQV TWDEPDLLQN VKCVSPWLIE LVSNFPMIHM SPFSPPRKKL RLPQPDFTLD  420
GQLTLPSFSG NPLGPSSPLC CLPDNTPAGI QGARHAQFRI SLSDLHINNK LQSGLFQSSF  480
QRFDQNSRIS NGIRAGHTSS NENLSCLLTM GNSSQNSEKS DNVKKHQFLL FGQPILTEQQ  540
ISRSCSSVAV SQLLTGKDSK DGNQDRTKFL SDGSKSAHGM QVSLEKSSNA GFPCNKDFQG  600
SDFDLDTGHC KVFMESEDVG RTLDLSVLGS YEELYRRLAN MFGIEKPEML SHVLYRDVTG  660
AVKQTGVEPF SDFMKKAKRL TILTHPTGES IGRTWIRGMQ NAENGLGATN KTGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein