PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g930690.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 173aa MW: 19609.1 Da PI: 6.8846 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.3 | 5.3e-18 | 8 | 140 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkat 86 p frFhPtd+e++ L k v +++ + + ++++ d++ + ePw++ + + + ++++yf ++ ++ + +g+r++r + +g W+ Pd.00g930690.m01 8 PLAFRFHPTDQEIIRSILYKMVVEREplnPSYKGIVHDEDLFGTkEPWKIWEDYGGdqlYDQDLYFLCQLKRLNFSGSRTHRkVGCEGSWRGG 100 778******************988887865556679999*998779****75333322255689******************5556******* PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k v++ + + +g + L + + ++ ++ W ++ey+l Pd.00g930690.m01 101 VASKLVYDGNANPIGRIRQLRYKN--PKSEHHGGWYLDEYSL 140 ********9999**********84..4444599*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MANSRHVPLA FRFHPTDQEI IRSILYKMVV EREPLNPSYK GIVHDEDLFG TKEPWKIWED 60 YGGDQLYDQD LYFLCQLKRL NFSGSRTHRK VGCEGSWRGG VASKLVYDGN ANPIGRIRQL 120 RYKNPKSEHH GGWYLDEYSL FVGDDGHDQT TPVVVAGVGL GINGGDVQVT VSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18270.2 | 8e-13 | NAC family protein |