PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g929680.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 117aa MW: 13635 Da PI: 9.2542 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 129.8 | 3e-40 | 1 | 116 | 258 | 374 |
GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgy 349 +eal+yysa+fdsl+a lp+ + r+k+E++++++ei+n+++ceg +r+erhe++ +Wr+r+++aGF+++p++ + +ak l k+k +gy Pd.00g929680.m01 1 MEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFAEEIKNIISCEGPARVERHERVDQWRRRMSRAGFQAAPIK--MLVNAKQWLGKIKvCEGY 91 69*********************************************************************97..5678999******99*** PP GRAS 350 rveeesgslvlgWkdrpLvsvSaWr 374 ++ ee+g+lvlgWk++p+v++S+W+ Pd.00g929680.m01 92 TILEEKGCLVLGWKSKPIVAASCWK 116 ************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MEALHYYSAI FDSLDAMLPK YDTRRAKMEQ FYFAEEIKNI ISCEGPARVE RHERVDQWRR 60 RMSRAGFQAA PIKMLVNAKQ WLGKIKVCEG YTILEEKGCL VLGWKSKPIV AASCWKC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 2e-30 | GRAS family protein |