PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g922710.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 323aa    MW: 36984.4 Da    PI: 10.1701
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g922710.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR195.84.9e-3068155290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY++YA+++GF +r+++ ++s r+g++++r++vC+keg+r+++ k+ +++r++ra tr gCka+++vkkek+gkw vt++++eHnH+l+
  Pd.00g922710.m01  68 FYDAYATHLGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKTRPKR-SENRKPRAITREGCKAMIVVKKEKSGKWIVTRFVKEHNHPLV 155
                       9*******************************************99.9***************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MIIDGRGLSK LLGQDLSLKT MDEQSSMSKD EDVIESSNGK DAVTSEGNSD MEPYVGMEFE  60
SEEAAKVFYD AYATHLGFIM RVDAFRRSMR DGKVVWRRLV CNKEGFRKTR PKRSENRKPR  120
AITREGCKAM IVVKKEKSGK WIVTRFVKEH NHPLVVTPAN GRRTVLLSQT PDEKDVKIRE  180
LMAELQRERK RSAAYQEQLD MVLREMEEHS NHLSRNIDGF VPLKRNGFFQ FSPSYMLWSQ  240
KAHGGNGGTV SFVHSITEFP SKSHTSPSWK ISERSISPTP VFLFCLNKPA GACQSVFSWL  300
LSITIWWGPW GLSIHFYSRK LRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.17e-90FAR1 family protein