PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g922680.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 268aa MW: 31047.2 Da PI: 6.1786

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g922680.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.1	9.4e-26	93	183	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY +Y+++ GF+vr++++++s++n+ ++ ++fvCs+eg+r+++ +++ + ++tr gC a+l+v +++ +kw+vtk+++eHnH+l+ Pd.00g922680.m01 93 DFYIAYGRDSGFTVRIHHNRRSRMNNMVIGQDFVCSREGFRDKKYVCrEDRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVKEHNHTLM 183 6***************************************998772333344899*****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MKRLVNYSVV QGAMECKANN ISFNSDESER CLEFESCDEH LLIDDDELPK DTDLCSLEVD 60 KIIQQPNASL PLMGNAVEPY IGMGFKSRDD ARDFYIAYGR DSGFTVRIHH NRRSRMNNMV 120 IGQDFVCSRE GFRDKKYVCR EDRVLPPPPV TREGCAAMLR VALRDGEKWV VTKFVKEHNH 180 TLMAASKVPW RGFGKNLISE DEKDQKIRDL TIELSNERQR CKRRCAAYQE QISMLLKDIQ 240 EHSDHLSTRV QDIVRNIREL ENEQCVDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	223	RQRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	2e-42	FAR1 family protein