PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g918520.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 511aa MW: 56443.8 Da PI: 6.6027

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g918520.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.6	1.7e-14	223	282	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g Pd.00g918520.m01 223 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEDKAARAYDLAALKYWG 282 57*****************666664478446******99***********98 PP
2	AP2	49.9	8.1e-16	325	376	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g Pd.00g918520.m01 325 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 376 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSPMEMLRSS ESESPFVPYD TSSTASPHYF LDNFYANGWT NPKSQGFFAD GEDHNNQSKQ 60 GHADSPNLTS FIDPQSHHQP IPKLEDFLGD SSSMVRYSDS QTETQDSSSL THMYDQSSAY 120 FGDHRQQQDL KAITGFQAFS TNSGSEVEDS ASMARTTQLA GGEFTGHSIE SNGNELGGGF 180 SSCGTNALSL GVTTQSSSQS KAIVPADSDG SKKIADTFGQ RTSIYRGVTR HRWTGRYEAH 240 LWDNSCRREG QARKGRQVYL GGYDKEDKAA RAYDLAALKY WGPTATTNFP VSTYSKELED 300 MKHVTKQEFI ASLRRKSSGF SRGASIYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE 360 EEAAEAYDIA AIKFRGINAV TNFEMNRYDV EAIGKSSLPV GGAAKRLKLS LEAEEQKPSV 420 NHDQQRPQCS SGSNNINFTS MQPAVQSIPC GIPYDAAAAT AYYHHNLFQQ FQPNYYGACD 480 SSGLTPSIAT QMSMMPQQPA EFYIWPHHQS N

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSPMEMLRSS ESESPFVPYD TSSTASPHYF LDNFYANGWT NPKSQGFFAD GEDHNNQSKQ  60
GHADSPNLTS FIDPQSHHQP IPKLEDFLGD SSSMVRYSDS QTETQDSSSL THMYDQSSAY  120
FGDHRQQQDL KAITGFQAFS TNSGSEVEDS ASMARTTQLA GGEFTGHSIE SNGNELGGGF  180
SSCGTNALSL GVTTQSSSQS KAIVPADSDG SKKIADTFGQ RTSIYRGVTR HRWTGRYEAH  240
LWDNSCRREG QARKGRQVYL GGYDKEDKAA RAYDLAALKY WGPTATTNFP VSTYSKELED  300
MKHVTKQEFI ASLRRKSSGF SRGASIYRGV TRHHQQGRWQ ARIGRVAGNK DLYLGTFATE  360
EEAAEAYDIA AIKFRGINAV TNFEMNRYDV EAIGKSSLPV GGAAKRLKLS LEAEEQKPSV  420
NHDQQRPQCS SGSNNINFTS MQPAVQSIPC GIPYDAAAAT AYYHHNLFQQ FQPNYYGACD  480
SSGLTPSIAT QMSMMPQQPA EFYIWPHHQS N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.1	0.0	AP2 family protein