PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g917970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 428aa MW: 47785.6 Da PI: 7.4125

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g917970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	61	4e-19	56	162	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 + F+ tdeel L k ++g++l+ +vi++++ y++ P++Lp + wyf +++++k t+ gyW+++g+ +++s + Pd.00g917970.m01 56 DIGFQCTDEELC-ISLGKIISGSPLPG-NVIEDANPYQLVPSNLP------DGFWYFIHSNENK---------PTNFGYWRTKGEACRIFS-N 130 56799****9.66*******9.99**********9......3568888887654.........4778**********.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g + tL fy+g+ap+ +ktdWvm+ey l Pd.00g917970.m01 131 SSITGWRATLEFYQGQAPHESKTDWVMQEYWL 162 99**************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MPKQHVVVSY FSATKSRNND EMEWKLRNEQ AKEVALWSWQ NPKVVMRPQS AALPADIGFQ 60 CTDEELCISL GKIISGSPLP GNVIEDANPY QLVPSNLPDG FWYFIHSNEN KPTNFGYWRT 120 KGEACRIFSN SSITGWRATL EFYQGQAPHE SKTDWVMQEY WLTQKKLSED SKAKEPRSLC 180 RVFCSNEQKS NCKNLQKMVS SDSASYSTHS AVPRAENCTS HSSTSKPQVI KDNEKGTLIV 240 TERVPDHNVQ IMPEVDYVSR GDYLELLDLD TPASFSFSSD SSCLTMSSDE CFDSLALLEE 300 LEPKNSQDLV NKNAGCKFSI SAPPRPDELV MFAASSGSFS KSPSEERVKT HSPILPGSAV 360 CGKISGKTSN NMSRIPKPDN RNEGGPSTSH NVDVSPSSHT ASQEGKRRAR TIGRTEKLKK 420 KYFCFMPF

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MPKQHVVVSY FSATKSRNND EMEWKLRNEQ AKEVALWSWQ NPKVVMRPQS AALPADIGFQ  60
CTDEELCISL GKIISGSPLP GNVIEDANPY QLVPSNLPDG FWYFIHSNEN KPTNFGYWRT  120
KGEACRIFSN SSITGWRATL EFYQGQAPHE SKTDWVMQEY WLTQKKLSED SKAKEPRSLC  180
RVFCSNEQKS NCKNLQKMVS SDSASYSTHS AVPRAENCTS HSSTSKPQVI KDNEKGTLIV  240
TERVPDHNVQ IMPEVDYVSR GDYLELLDLD TPASFSFSSD SSCLTMSSDE CFDSLALLEE  300
LEPKNSQDLV NKNAGCKFSI SAPPRPDELV MFAASSGSFS KSPSEERVKT HSPILPGSAV  360
CGKISGKTSN NMSRIPKPDN RNEGGPSTSH NVDVSPSSHT ASQEGKRRAR TIGRTEKLKK  420
KYFCFMPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	2e-20	NAC family protein