PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g908990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 640aa    MW: 72190.5 Da    PI: 5.3234
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g908990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS286.67.1e-882756382374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        + Ll++Ae v  +++e+a++lL r + +a  +g+p+qR+++yf+eAL++r+ r++ ++ ++ +  + s +  s++   + + ++  P++ + 
  Pd.00g908990.m01 275 AHMLLAAAEKVGYQQFERANRLLLRCEWIAYFKGNPVQRVVFYFAEALRERIERETGSIPSKAKEMSISGHGLSTNP-TYIACHQEVPFHSVM 366
                       699***************************************************77777666655555543344443.444466778****** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       ++t  qaI e+v+ e++vH iD++i  G+QW  L+++La+R+e p   l iT+vg+     k+++eetg+rL+++Ae+l++pf+f++++ +++
  Pd.00g908990.m01 367 QFTGIQAIIESVSLESKVHLIDLEIRSGVQWTGLMESLAEREECPVeLLTITAVGE---AGKQKIEETGKRLTSVAESLNIPFQFKAVIISAM 456
                       ******************************************7666489*******...589******************************* PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres 279
                       ed++ + ++v+ +Ea+aV   l l ++ +++ +le+    +++++++l P ++vv+e ea+hns+sF++rf++al yysa+fd+le+ + +++
  Pd.00g908990.m01 457 EDIKDQLFDVEDDEAVAVYAPLILRTMISRPSCLEN----LMRVMRNLTPCIMVVIEVEANHNSPSFVNRFIDALFYYSAFFDCLETCM-KQE 544
                       ****************************88888888....***********************************************96.555 PP

              GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372
                       e r+ +E   +++ i+n+va+eg+er+ r  ++  Wr+ + ++G+ ++++s+    qa+l+ ++++    +++ + ++l+ gWk+ p+ svSa
  Pd.00g908990.m01 545 EYRVLMEDL-FREGIRNIVAAEGSERVVRSVKMDVWRAFFARFGMVEMNFSNASLYQASLVAKRFGCPSCTLDRNGKCLIVGWKGTPIHSVSA 636
                       667777766.********************************************************999************************ PP

              GRAS 373 Wr 374
                       W+
  Pd.00g908990.m01 637 WK 638
                       *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    
MANAFFPFTP FDFGVLGGLT PQLEDYEKDQ EVAFKVKRGH LFAIEELGLG EMDSALSSEH  60
GFYQEDSKAK KGGLSHFSKD PNPTYSLSDN FNFDIVSSEH GFQQSNKSEK GLAHLSKDQD  120
YHHYQQHPHY QQQQPKSNYS ILDNFNFDSA FPPAQPIQDG THQFTYNQIG GSDIAETNKD  180
LPHQSSLAVL ELLNSYGSAF KKLRGERTSS NTGNEAEASS YVGQQKLSTE EIMRVAGARY  240
VQFSNQGYGD FYPLHPFGYA LSGLSEEETK DAELAHMLLA AAEKVGYQQF ERANRLLLRC  300
EWIAYFKGNP VQRVVFYFAE ALRERIERET GSIPSKAKEM SISGHGLSTN PTYIACHQEV  360
PFHSVMQFTG IQAIIESVSL ESKVHLIDLE IRSGVQWTGL MESLAEREEC PVELLTITAV  420
GEAGKQKIEE TGKRLTSVAE SLNIPFQFKA VIISAMEDIK DQLFDVEDDE AVAVYAPLIL  480
RTMISRPSCL ENLMRVMRNL TPCIMVVIEV EANHNSPSFV NRFIDALFYY SAFFDCLETC  540
MKQEEYRVLM EDLFREGIRN IVAAEGSERV VRSVKMDVWR AFFARFGMVE MNFSNASLYQ  600
ASLVAKRFGC PSCTLDRNGK CLIVGWKGTP IHSVSAWKFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-50GRAS family protein