PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g908410.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YC
Protein Properties Length: 164aa    MW: 18527.2 Da    PI: 6.6805
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g908410.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC161.71.1e-5028815101
             NF-YC  15 dfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                       dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflvdivpr++l
  Pd.00g908410.m02   2 DFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 88 
                       9***********************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MDFKNHSLPL ARIKKIMKAD EDVRMISAEA PVIFARACEM FILELTLRSW NHTEENKRRT  60
LQKNDIAAAI TRTDIFDFLV DIVPREDLKD EVLASIPRGG NLPVGSSTDG VPYYYMPAQH  120
APQVGAPGMI VGKPVMDQTL YGQQTHPYIA QPTWPQQQQP HKDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15864RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.31e-76NF-YC family protein