PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g904910.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 696aa MW: 77645.4 Da PI: 7.4376

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g904910.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.2e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+ +v+++G g+W + +++ g+ R++k+c++rw++yl Pd.00g904910.m01 16 KGPWTPAEDQKLLAYVQKHGHGNWQSLPEKAGLQRCGKSCRLRWRNYL 63 79*********************************************7 PP
2	Myb_DNA-binding	45.9	1.3e-14	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++ +Ed+ +++++++lG++ W++I ++++ +Rt++++k++w++ Pd.00g904910.m01 69 RGNFSLQEDQTIIQLHALLGNR-WSAITAHLP-KRTDNEVKNYWHS 112 89******************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 696 aa Download sequence
MGKSTHDCVA SSSVKKGPWT PAEDQKLLAY VQKHGHGNWQ SLPEKAGLQR CGKSCRLRWR 60 NYLRPDIKRG NFSLQEDQTI IQLHALLGNR WSAITAHLPK RTDNEVKNYW HSRLKKRLAL 120 KGYDPVTHKP KNTIFGFANG STDDPKTGSN LNHIAQWESV RLQAEARYVR DSELHKQAYH 180 PYNNNDISAA SSILSCYNKD FGQNAPQCLD MLRASEIILM SNYSKAAGGQ DHVNSFGNHL 240 TGDFEPPIIS AISSNGSSLI DCFFHELAGQ CFDENYGTSI TKPFAAVHHN MGFKNGACLE 300 DSGLWEIIMQ GKKDCPISGI THRFDQYSLQ EPASANPFVS ATKKCGVSVP SNSILAIAIQ 360 LNTRKFPAGQ QHKDRIYPGF QASQMDWSDN GGLFLLSNNS AFALGFYQAL DVKLYLLVVI 420 HLGTSKVVWI ANRGLLISNS DKFAFDKNGN AYLRSSNDLV WSTNTTGEVV SAMQLQDSGN 480 LEYSEGMKLK SSRNRNNVSH YIEVQSGELV LYAGYQTPQL YWSMADDSRK TNNNVSGKIH 540 SLSLVSNSWN FNDSFQTQND RSLIYSDRSP DENDRSPAAN DRSQTTLPES DRSHSSHDRS 600 PRTSQRTIPT LPENDRSPDP HDRSLSPVFA EVVPLQSDPS HHTQEERIEE FMPTPENSSA 660 PVPHQSSAED VIQLKVVKGV HSAFTLEFDP NHSKLG

Sequence ? help Back to Top

Protein Sequence Length: 696 aa Download sequence

MGKSTHDCVA SSSVKKGPWT PAEDQKLLAY VQKHGHGNWQ SLPEKAGLQR CGKSCRLRWR  60
NYLRPDIKRG NFSLQEDQTI IQLHALLGNR WSAITAHLPK RTDNEVKNYW HSRLKKRLAL  120
KGYDPVTHKP KNTIFGFANG STDDPKTGSN LNHIAQWESV RLQAEARYVR DSELHKQAYH  180
PYNNNDISAA SSILSCYNKD FGQNAPQCLD MLRASEIILM SNYSKAAGGQ DHVNSFGNHL  240
TGDFEPPIIS AISSNGSSLI DCFFHELAGQ CFDENYGTSI TKPFAAVHHN MGFKNGACLE  300
DSGLWEIIMQ GKKDCPISGI THRFDQYSLQ EPASANPFVS ATKKCGVSVP SNSILAIAIQ  360
LNTRKFPAGQ QHKDRIYPGF QASQMDWSDN GGLFLLSNNS AFALGFYQAL DVKLYLLVVI  420
HLGTSKVVWI ANRGLLISNS DKFAFDKNGN AYLRSSNDLV WSTNTTGEVV SAMQLQDSGN  480
LEYSEGMKLK SSRNRNNVSH YIEVQSGELV LYAGYQTPQL YWSMADDSRK TNNNVSGKIH  540
SLSLVSNSWN FNDSFQTQND RSLIYSDRSP DENDRSPAAN DRSQTTLPES DRSHSSHDRS  600
PRTSQRTIPT LPENDRSPDP HDRSLSPVFA EVVPLQSDPS HHTQEERIEE FMPTPENSSA  660
PVPHQSSAED VIQLKVVKGV HSAFTLEFDP NHSKLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	1e-81	MYB family protein