PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g903670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 105aa    MW: 11962.4 Da    PI: 7.7054
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g903670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26078.41.2e-241582168
            DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAear 68
                      aCa+Ck++rrkC + C +apyfp+++ ++f+n+hk+FG+sn++k+++ + +++r++a++s++  ++ +
  Pd.00g903670.m01 15 ACASCKHQRRKCDETCEMAPYFPDSRYSEFQNAHKIFGVSNIQKIMAMAAPDQRQAAAESILTDGREC 82
                      7************************************************************9765544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    
MENRDQGACA AQNHACASCK HQRRKCDETC EMAPYFPDSR YSEFQNAHKI FGVSNIQKIM  60
AMAAPDQRQA AAESILTDGR ECKEKWSCAW LSWHYQKSQC PNSVT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.13e-17LBD family protein