PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g902290.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 410aa MW: 45723.7 Da PI: 5.0699 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 62.2 | 8.3e-20 | 51 | 141 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k l++s+v + ++ lp f+++h + +++t+tledesgr+ ++k+i k++ l++GW++F+ +++L egD++vF+l++ ++f + Pd.00g902290.m01 51 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--K 135 89************************644..678****************666665....9**********************9876666..9 PP EEEE-S CS B3 94 vkvfrk 99 v ++r+ Pd.00g902290.m01 136 VYIIRS 141 998886 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 410 aa Download sequence |
MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK SSAVIQAQEV RSKLEPRFPS FVKSLVRSHV 60 ASCFWMGLPS LFCKSHLPDK DITMTLEDES GRQCQLKYIA YKTGLSAGWR QFAASHNLIE 120 GDVLVFQLVE PTKFKVYIIR SNDLTEVDGG LGLLNLDSHT KRKDADKDNA ETGTEACNDA 180 TRKRAHSPPS EAQKKKKIGL QPVEQSEDDS DEVDSEVLEE SKSPDTALQF EDIQSFENFS 240 ILVNGLLVDS ELPEDVRRKY YKLCCSQNAF LHENVAEGMN HKLVVGAISE TVNIADAIKA 300 CKLTTTWDDF VSWDKYLKAL ELLGMNVGFL RDRLCRLANL SNDSGAAVEA RMYKEAKIER 360 SQAGIGIRNI EVKLEELRDV CDEFGAAIES LRSKAEIYTL KFHEEVTAPW |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 182 | 197 | RKRAHSPPSEAQKKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19184.1 | 2e-38 | B3 family protein |