PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g902290.m01
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 410aa    MW: 45723.7 Da    PI: 5.0699
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g902290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.28.3e-2051141199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k l++s+v +  ++ lp  f+++h  +  +++t+tledesgr+ ++k+i  k++    l++GW++F+ +++L egD++vF+l++ ++f  +
  Pd.00g902290.m01  51 FVKSLVRSHVASCFWMGLPSLFCKSHLPD--KDITMTLEDESGRQCQLKYIAYKTG----LSAGWRQFAASHNLIEGDVLVFQLVEPTKF--K 135
                       89************************644..678****************666665....9**********************9876666..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  Pd.00g902290.m01 136 VYIIRS 141
                       998886 PP

Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MLGQAGKSPA LSNTQYEFPV DGSPSRGQAK SSAVIQAQEV RSKLEPRFPS FVKSLVRSHV  60
ASCFWMGLPS LFCKSHLPDK DITMTLEDES GRQCQLKYIA YKTGLSAGWR QFAASHNLIE  120
GDVLVFQLVE PTKFKVYIIR SNDLTEVDGG LGLLNLDSHT KRKDADKDNA ETGTEACNDA  180
TRKRAHSPPS EAQKKKKIGL QPVEQSEDDS DEVDSEVLEE SKSPDTALQF EDIQSFENFS  240
ILVNGLLVDS ELPEDVRRKY YKLCCSQNAF LHENVAEGMN HKLVVGAISE TVNIADAIKA  300
CKLTTTWDDF VSWDKYLKAL ELLGMNVGFL RDRLCRLANL SNDSGAAVEA RMYKEAKIER  360
SQAGIGIRNI EVKLEELRDV CDEFGAAIES LRSKAEIYTL KFHEEVTAPW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182197RKRAHSPPSEAQKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.12e-38B3 family protein