PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g898770.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 435aa MW: 49276.2 Da PI: 6.4092 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 52.4 | 1.8e-16 | 8 | 141 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiy..kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWka 85 p GfrF+Ptd+e+v +L+ + ++k + +++i+ +d++ k+eP+++ +k+ + ++++yf s +k ++ kr r + + g+W++ Pd.00g898770.m01 8 PLGFRFQPTDQEIVGSFLHTLLVERKplmPPYSNFIRACDLLgkKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDRsIGNGGTWSE 98 89******************988877787666778*****864478*****7544333335668888888877655..68888566799**** PP NAM 86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 t + k + + + + +g k+ + + + + + e+t W+++ey+l Pd.00g898770.m01 99 TESFKLIEDDngNPNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 141 *******998444455********984..334469********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 435 aa Download sequence |
MAHHHNVPLG FRFQPTDQEI VGSFLHTLLV ERKPLMPPYS NFIRACDLLG KKLEPSEIWN 60 KYGGPQLVDQ DLYFLSGLKK LTPKRMDRSI GNGGTWSETE SFKLIEDDNG NPNPIGRKRK 120 FRYENKGSEE HTWWLLDEYS LCVGPKNDYN DRSYDFEFVI CRMRKNDRAS SKEINLKRSS 180 QDQVQKKRST NKKMKKDHHM GSTEESSSHV QQGYSSSITG GELVVSYDDV DPNGLTFFED 240 NPIFNIEQIL CETKVEDACS PSNSENVDSS YSHYFNTKGV FTTDFPDRPP TPFNYTGAPL 300 TASLGTKLGT RLSKLAFNST VELVLQDTNL LTVESHPFHL HGYNFFVVGT EVGNFDPKND 360 LAKYNLVDPP ERNTIGVPTG GWVAIRFRAD NPGVWFMHCH LELHTSWGLK TAFVVESGKD 420 SDHSILPPPT DLPPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G01520.1 | 8e-09 | NAC family protein |