PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g894460.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C3H | ||||||||
Protein Properties | Length: 234aa MW: 26133.7 Da PI: 7.6094 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 20.7 | 7.2e-07 | 91 | 115 | 5 | 26 |
--SGGGGTS...--TTTTT-SS-SS CS zf-CCCH 5 lCrffartG...tCkyGdrCkFaHg 26 +C+ a+ G C+y d+C+F+H+ Pd.00g894460.m01 91 ICPEVAKRGdvsRCPYSDKCRFSHD 115 699999999999************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MDESPAETAP VPEVSNGWAD RTPEELVAKS IAPVKKQFLC PPPIRACSNE QNDAVSGGKT 60 KPAQTSVVKE KKSKRQLKRE RQQAVKSAVG ICPEVAKRGD VSRCPYSDKC RFSHDIEAYK 120 AQKPEDIEGD CPFMTAQETC PYGLACVETT RRFLLEWLSY TCRYVPVGLL EVIPQRLSWR 180 PPSYFGRDDL ETLMASDSAA DWVRISEMLL GKVPDGFTFA PKHKSNSYDR AENG |