PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g889360.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 214aa    MW: 24275.6 Da    PI: 8.3177
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g889360.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.33.7e-27959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      kri++k++rqvtfskRr g++KKA ELSvLC +ev +iifs +g+lye++s
  Pd.00g889360.m01  9 KRIDDKIRRQVTFSKRRSGLIKKARELSVLCSVEVGLIIFSAKGRLYEFCS 59
                      79***********************************************96 PP
2K-box341.2e-1210317528100
             K-box  28 ienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       +++L++ q  l  +++e+L++ eL qLe+qL++ l++ Rs+K++l+++++  l +kek+lqee+  ++k+++e
  Pd.00g889360.m01 103 NRSLKTIQSELEAQNIENLDVTELTQLEKQLDTLLRQTRSRKTQLMMDSLTALIEKEKQLQEEKLLMEKEIAE 175
                       7889999999999**************************************************9998888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGRGKVQLKR IDDKIRRQVT FSKRRSGLIK KARELSVLCS VEVGLIIFSA KGRLYEFCSG  60
ESLGKVLERY QIHNDEENAA PKSVGGTGKK NPSEWSGLCA GPNRSLKTIQ SELEAQNIEN  120
LDVTELTQLE KQLDTLLRQT RSRKTQLMMD SLTALIEKEK QLQEEKLLME KEIAELKEQK  180
NKEQAEEADQ QSCSANNNNS DDNAPPRQTM LHLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30260.16e-40MIKC_MADS family protein