PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g888970.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 649aa MW: 72869.1 Da PI: 6.3528

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g888970.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	62.6	6.5e-20	125	222	1	95
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr. 87 f+k+l++sdv++++r++lpkk ae+h ++++e++ +++ d +g +W++k+++ +++s++yvl+ ++ eFv+a+gL+ gDf++ + + Pd.00g888970.m01 125 FQKELKNSDVSSLRRMILPKKAAEAHlpALESKEGIPISMDDIDGlHVWSFKYRFwpNNNSRMYVLE-NTGEFVNAHGLQLGDFIMVYQ--Dn 214 99************************666668889****9***99899999999.*****************993..33 PP SEE..EEE CS B3 88 sefelvvk 95 +++++v++ Pd.00g888970.m01 215 QNQNYVIQ 222 66666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 649 aa Download sequence
MMDQAAASAA AGLIHHEKTE ACALRAGVEA DLGLVTAKGD KTSFHGSDRS GSIHDHDDLV 60 HAVTSFGVHR KKRMTRQRRS SIINLHHLTF ASSTTTTSHV LPSLQPPSTL PPARVIDPTR 120 LRFLFQKELK NSDVSSLRRM ILPKKAAEAH LPALESKEGI PISMDDIDGL HVWSFKYRFW 180 PNNNSRMYVL ENTGEFVNAH GLQLGDFIMV YQDNQNQNYV IQAKKASDQD HVYGDISTMN 240 NGVNGLFLDE SEANKSSSFY MPTMAMDEDT TAGMSFVYWV VSLPVQNSAS SLWNRLQEQI 300 SKHSFDTPLY RFNIPNLRVG TLDSLLSLSD DLLKSNNFVE GVSHKIRRQI EELERVSGVE 360 SSALTVDGVP VDSYLTRFVW DEAKYPTMSP LKEVVDSIHG QVAKIEDDLK VRVAEYNNVR 420 SQLNAINRKQ SGSLAVRDLS NLVKPEDIVT SEHLVTLLAV VPKYSQKDWL SSYETLTNYV 480 VPRSSKKLFE DNEYALYTVT LFNRVADNFR TSAREKGFQI RDFEYSSEAQ ESRKQELEKL 540 VQDQENLRSS LLQWCYASYG EVFSSWMHFC AVRIFAESIL RYGLPPSFLA CVLAPTTKSE 600 KKVRSILEGL CDSGNSTFWK TDDEVGGAMA GLGGEADAHP YVSFTINLV

Sequence ? help Back to Top

Protein Sequence Length: 649 aa Download sequence

MMDQAAASAA AGLIHHEKTE ACALRAGVEA DLGLVTAKGD KTSFHGSDRS GSIHDHDDLV  60
HAVTSFGVHR KKRMTRQRRS SIINLHHLTF ASSTTTTSHV LPSLQPPSTL PPARVIDPTR  120
LRFLFQKELK NSDVSSLRRM ILPKKAAEAH LPALESKEGI PISMDDIDGL HVWSFKYRFW  180
PNNNSRMYVL ENTGEFVNAH GLQLGDFIMV YQDNQNQNYV IQAKKASDQD HVYGDISTMN  240
NGVNGLFLDE SEANKSSSFY MPTMAMDEDT TAGMSFVYWV VSLPVQNSAS SLWNRLQEQI  300
SKHSFDTPLY RFNIPNLRVG TLDSLLSLSD DLLKSNNFVE GVSHKIRRQI EELERVSGVE  360
SSALTVDGVP VDSYLTRFVW DEAKYPTMSP LKEVVDSIHG QVAKIEDDLK VRVAEYNNVR  420
SQLNAINRKQ SGSLAVRDLS NLVKPEDIVT SEHLVTLLAV VPKYSQKDWL SSYETLTNYV  480
VPRSSKKLFE DNEYALYTVT LFNRVADNFR TSAREKGFQI RDFEYSSEAQ ESRKQELEKL  540
VQDQENLRSS LLQWCYASYG EVFSSWMHFC AVRIFAESIL RYGLPPSFLA CVLAPTTKSE  600
KKVRSILEGL CDSGNSTFWK TDDEVGGAMA GLGGEADAHP YVSFTINLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	3e-75	B3 family protein