PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g887130.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 389aa MW: 42463.2 Da PI: 8.7975

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g887130.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.1	4.1e-25	148	192	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep rCrRtDGKkWRCsr+v++g+k+CErH+hrgr+rsrk++e+ Pd.00g887130.m01 148 DPEPTRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVEA 192 79****************************************986 PP
2	QLQ	51.6	2.9e-18	76	112	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+F+ +Qlq+L+ Q+l+++y++a++ vPpeLlq+i+k Pd.00g887130.m01 76 SYFSFSQLQELELQALIFRYMLAGAVVPPELLQPIRK 112 79*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MDFHLKQWRN QQHESEEQHS AKIPKLHLEP HPHSEPSGYA LPLFVPEPNS KMISTLSAFS 60 ESTPASASTR FPKMGSYFSF SQLQELELQA LIFRYMLAGA VVPPELLQPI RKSLLHSPPY 120 FLHHPLQQYP HFQPALLQSG YWGRAAMDPE PTRCRRTDGK KWRCSRDVVA GQKYCERHVH 180 RGRNRSRKPV EATTAAAAAA GGGASDIAAN TTTKTSSGGA HFTLSGSSSP SIDLLHLNQS 240 SSESKAENRS LFEPHSEVSG SAKSDSHVLR PFFDDWPGKL QELDNARTNA GSMNSATSLS 300 ISIRGNSSSD VSLKLSTGNG VETGRQDGHA EREQPQLNWP AGWGTNQMAS MGGPLAEALR 360 SSSNSNSSPT SVLHQLPRIS ASETSFIST

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MDFHLKQWRN QQHESEEQHS AKIPKLHLEP HPHSEPSGYA LPLFVPEPNS KMISTLSAFS  60
ESTPASASTR FPKMGSYFSF SQLQELELQA LIFRYMLAGA VVPPELLQPI RKSLLHSPPY  120
FLHHPLQQYP HFQPALLQSG YWGRAAMDPE PTRCRRTDGK KWRCSRDVVA GQKYCERHVH  180
RGRNRSRKPV EATTAAAAAA GGGASDIAAN TTTKTSSGGA HFTLSGSSSP SIDLLHLNQS  240
SSESKAENRS LFEPHSEVSG SAKSDSHVLR PFFDDWPGKL QELDNARTNA GSMNSATSLS  300
ISIRGNSSSD VSLKLSTGNG VETGRQDGHA EREQPQLNWP AGWGTNQMAS MGGPLAEALR  360
SSSNSNSSPT SVLHQLPRIS ASETSFIST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52910.1	2e-87	GRF family protein