PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g876870.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | Nin-like | ||||||||
Protein Properties | Length: 646aa MW: 71412.9 Da PI: 6.9196 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.9 | 4.8e-29 | 570 | 620 | 1 | 51 |
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki++ Pd.00g876870.m01 570 AEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINK 620 589**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 646 aa Download sequence |
MEYPVTPKEK GSDHWASSRA QVENLGSLDV GTRNSISEDM FNNISELMNF DTYAGWCSPA 60 AMDQISASFG VPSCPSVTYA PLDALNFAEQ NGEALPGTEG GETFNVGGSS FSCEDKIVFQ 120 QMDTPQFGVS TDSHDANDLA AKLNNGSFQQ NNVMDVGKYM ISRPPGLSLN EKMLKALSLF 180 KESSGGGILA QLWVPVKYGD HYLLSTSEQP YLLDHILAGY REVSRTFTFP AEEKQGSILG 240 LPGRVFVSKV PEWTSNVSYY NKAEYLRVDH AVNHQVRGSI ALPVFNFDSE MSCCAVLELV 300 STKEKPNFDT EMEIVCNALQ AVNLRTMVPP RLLPQCLSMN QRAALTEITD VLRAVCHAHI 360 LPLALTWIPC CYSEGDGDEI RRVRVRGGIT NSNEKSILCI DETACYVNDR MMQGFVHACV 420 EHHLEVGEGI AGKALQSNHP FFLHDVKVYD IYEYPLVHHA RKYGLNAAVA IRLRSTYTGT 480 MQKMCKSLRT VSDAELAGVQ GSDTGFQKGP IPNSPQQRNS QTASSDSEFN SIENMPSDVF 540 NRRNAGIEAE NPCEQAPGSR RQMEKKRSTA EKNVSLSVLQ QYFSGSLKDA AKSIGVCPTT 600 LKRICRQHGI SRWPSRKINK GPSSKTLMLR KVVYSLRRAC LFNILS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43500.1 | 0.0 | Nin-like family protein |