PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g876570.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

DBB

Protein Properties

Length: 238aa MW: 26010.4 Da PI: 4.6135

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g876570.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ Pd.00g876570.m01 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	28.6	2.9e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + ++C+ +++k + +fC +++ l+C+dC + +H+ H Pd.00g876570.m01 53 KLPRCDICQDKAAFIFCVEDRALFCQDCDEPIHSAnslsanH 94 789******************************655666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLNCL SNKLPRCDIC 60 QDKAAFIFCV EDRALFCQDC DEPIHSANSL SANHQRFLAT GIRVALSSSC TKEAETSSLE 120 PPERSTQQIS TKISAPQASG ISSPWGVDDL LQLSDFESSD KKESLEFGEL EWIADMGLFG 180 EQFPQKAVAA AEVPQLPASQ PSNFASYRPP KSNGPYKKPR IEISDDDEHF TVPDLGIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	1e-104	DBB family protein