PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g876490.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 288aa    MW: 33407.8 Da    PI: 7.2056
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g876490.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-26115206191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY+ Y++++GF++r++++++s +++ i+ r+fvCskeg+r+e+    +++r   +r+ tr gC+a+l+++ ++ gkw+++ +++eHnHel+p
  Pd.00g876490.m01 115 DFYEMYGRHMGFTIRNNRTRRSLKDNAIIGREFVCSKEGFRAEKYAM-SQNRVlpSRPATRKGCNAMLRITAKDGGKWVIYGFVKEHNHELNP 206
                       6*********************9********************9887.33333459**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGGRFWCYVA LKFNIMGTVR QIPDSLCDGL QKVLVLPNHK LRLMMASTSG QGFSPERNYR  60
CWLDETFSSH ETADDELSYT PDVDNNLIET SSQDFSLSLE PVIGMEFESA EDARDFYEMY  120
GRHMGFTIRN NRTRRSLKDN AIIGREFVCS KEGFRAEKYA MSQNRVLPSR PATRKGCNAM  180
LRITAKDGGK WVIYGFVKEH NHELNPNKIP PRRSHRIAFC EDEKDLKIRE LSTELHREKK  240
KSAAYQEKLQ IVLKYIEEHT QRLSLKVELA TNNMRELESE EQDSSYSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.13e-46FAR1 family protein