PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g866600.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 474aa    MW: 52941.1 Da    PI: 5.8578
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g866600.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS465.43.2e-142494711374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lLl+cA++v++g+le+a+ +L+++s+las dgd+mqR+aayfteALa r+++ +++l +al++++ s   +see+ ++k+f+e+ P+lk+
  Pd.00g866600.m01  49 LIHLLLTCANHVATGSLENANVALEQISQLASADGDTMQRIAAYFTEALADRILKAWPGLHRALNSTKIS--LVSEEFLVQKVFFEMLPFLKV 139
                       689*************************************************************999998..79******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                       ++++aNqaI ea+ege++vH+iD+++ +++QW+aLlq L++Rpegpp+lRiTgv++    +ke l ++++rL+  Ae+l++pf+f + ++++l
  Pd.00g866600.m01 140 AFVLANQAITEAMEGEKMVHVIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQ----QKEVLDQMAHRLTVEAEKLDIPFQFCP-IVSKL 227
                       ********************************************************....9**************************.7999* PP

              GRAS 187 edleleeLrvkpgEalaVnlvlqlhrll......................................................desvsles..e 223
                       e+l++e+Lr+k+gEala+++vlqlh+ll                                                      ++++sl+   +
  Pd.00g866600.m01 228 ENLDMEKLRIKTGEALAISSVLQLHSLLasddellkkksplasksssgiplprvlqmnqgtlgellekemgngysaspdstsSSPLSLTAsmK 320
                       *******************************************************************************99944444444447 PP

              GRAS 224 rdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWr 316
                        d++L++++sl Pkv+v++eq+++hn+++++er+leal+ y+alfd+le++++r+s er kvE++l+g+ei+n++aceg er+erhe+lekW 
  Pd.00g866600.m01 321 LDSFLNAFWSLTPKVMVITEQDSNHNGSTLMERLLEALYSYAALFDCLESTMSRNSIERLKVEKMLFGEEIKNIIACEGCERKERHEKLEKWI 413
                       799****************************************************************************************** PP

              GRAS 317 erleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       +rl+ aGF++vpls++ + qak+ll+ ++ dgyr+ ee+g++++ W+drpL+svSaWr
  Pd.00g866600.m01 414 QRLDLAGFGNVPLSYYGMLQAKRLLQGYGCDGYRMREENGCVLISWQDRPLFSVSAWR 471
                       *********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 474 aa     Download sequence    
MTPMFQDEGS SSATSSPLQF FSMMSLSPSL GSPYPWLKEL KSEERGLYLI HLLLTCANHV  60
ATGSLENANV ALEQISQLAS ADGDTMQRIA AYFTEALADR ILKAWPGLHR ALNSTKISLV  120
SEEFLVQKVF FEMLPFLKVA FVLANQAITE AMEGEKMVHV IDLNAAEPAQ WIALLQVLSA  180
RPEGPPHLRI TGVHQQKEVL DQMAHRLTVE AEKLDIPFQF CPIVSKLENL DMEKLRIKTG  240
EALAISSVLQ LHSLLASDDE LLKKKSPLAS KSSSGIPLPR VLQMNQGTLG ELLEKEMGNG  300
YSASPDSTSS SPLSLTASMK LDSFLNAFWS LTPKVMVITE QDSNHNGSTL MERLLEALYS  360
YAALFDCLES TMSRNSIERL KVEKMLFGEE IKNIIACEGC ERKERHEKLE KWIQRLDLAG  420
FGNVPLSYYG MLQAKRLLQG YGCDGYRMRE ENGCVLISWQ DRPLFSVSAW RCRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein