PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pd.00g865550.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | HB-other | ||||||||
Protein Properties | Length: 491aa MW: 55463.4 Da PI: 7.8894 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.2 | 3.3e-19 | 20 | 75 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ ql +Le+++++++yp++e++ + A++lgL+e+q++ WF+ rR k+k+ Pd.00g865550.m01 20 KKRKLKTPAQLMALEKFYNEHKYPTEEMKSQVAEQLGLSEKQISGWFCHRRLKDKR 75 89****************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 491 aa Download sequence |
MEESNELHSE ENKTSQDNNK KRKLKTPAQL MALEKFYNEH KYPTEEMKSQ VAEQLGLSEK 60 QISGWFCHRR LKDKRSSRDE TCANGRQDRS SGVIQDRASG LGQDSCGSTK HGDHRYVDPR 120 EVESRRLSGH DFPAADITRE YRSHYTERVG GMDNTSSESS SSLQDRFFTQ NEDPYDVETS 180 RYLAHNGVFS PINPRGTENM AYKPSGYLKV KGEAENAAIT AVKRQLGRHY QEDGPPLGVE 240 FDLLPPGAFE SPIMDSVHEP SIVGNPVLRS PDISGVKGQL SPRTRYEVYN SKFSSQDSYI 300 QQENPCIMHG FDLQEKKSSK KLRQKSTYIN HTNSSPGKNS SLDIYDKSVG GTSAYNPNRK 360 DKMRSKRGYS GRKVTSEQTE PCLHEYDRVS SPKLVQRSDY LKPKPSSSIE ENLDGECKAM 420 KVYSNPLRVM MNSTDEMVVA KQARVNLPQR DYSTNSFPQL PPRKNQIKGT AMEMPSSFSE 480 DETAETNSSV D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G03250.1 | 1e-100 | HB-other family protein |